Yoonia vestfoldensis: LOKVESSMR4R_02486
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Entry
LOKVESSMR4R_02486 CDS
T04854
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lvs
Yoonia vestfoldensis
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvs03021
]
LOKVESSMR4R_02486 (rpoH)
Transcription machinery [BR:
lvs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOKVESSMR4R_02486 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
GxGYxYP_N_2nd
TC1
UBA_3
Motif
Other DBs
NCBI-ProteinID:
ARU01789
UniProt:
A0A1Y0EEE1
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Position
2477249..2478103
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AA seq
284 aa
AA seq
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MNKHAPNWGTRTRRARSADMLSAEEESHLVRAWQDHGDEKARDTLIRAFAPMAAAKAKQS
APGGGEADHDLVQQANIGLLKAADRFDPDRGYRFSTYAVWWIRAEIQEYKRANVSVVRRP
NSAQSRKVASLLARLDTTMAANPDRSEANESIANDLGIPIDRLADLSAQITGRDYSLNVP
ALNDQSQDRLALLVDPASLDEPAALHRLDTANLRRALVQALSDLPDRERKIVVATQLYDP
PATLDALGSAYGISRERVRQLRERGFERLRDILRERDLAPESFL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcatgccccgaattggggaacccgtacccgccgtgcccgcagcgccgacatg
ctatcggccgaggaggaaagtcatctggtgcgcgcctggcaagaccacggcgacgagaaa
gcgcgcgacacgctgatccgcgccttcgcgcccatggccgcggcaaaagccaagcaatct
gcgccgggaggcggagaggccgaccacgatctggtgcagcaagccaatattggacttctc
aaggcagccgatcgttttgatccagatcgtggctatcgattttcaacctatgctgtctgg
tggatccgtgccgaaattcaggagtacaagcgcgcgaatgtgtcagttgtccggcgacct
aattccgcgcagtctcgaaaagtggccagcctcctcgcgcgtctagacaccacgatggcg
gccaatcccgatcggtctgaggcaaatgagagcatcgccaacgatctcggtatccctatc
gatcgcttggccgatctaagcgctcagatcactggcagggattactccttgaatgtcccg
gccctcaatgaccagagccaagatcgcttggccctgctggttgatccggccagtctcgac
gaaccggcggcccttcaccgtctagacacggcgaacctgcgccgtgcgcttgtccaggcg
ctctccgatttaccggaccgggagcggaaaatcgttgtggccactcagctatacgaccca
cccgcgacgcttgacgctctgggctcggcttatggcatctcgagggaacgcgttcgccag
ttgcgcgaacgtggctttgaaaggcttcgcgatattttacgggagcgcgatctggcgcct
gagagtttcctgtaa
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