Yoonia vestfoldensis: LOKVESSMR4R_02689
Help
Entry
LOKVESSMR4R_02689 CDS
T04854
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs03030
DNA replication
lvs03410
Base excision repair
lvs03420
Nucleotide excision repair
lvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOKVESSMR4R_02689 (polA)
03410 Base excision repair
LOKVESSMR4R_02689 (polA)
03420 Nucleotide excision repair
LOKVESSMR4R_02689 (polA)
03440 Homologous recombination
LOKVESSMR4R_02689 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvs03032
]
LOKVESSMR4R_02689 (polA)
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_02689 (polA)
Enzymes [BR:
lvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOKVESSMR4R_02689 (polA)
DNA replication proteins [BR:
lvs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LOKVESSMR4R_02689 (polA)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LOKVESSMR4R_02689 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOKVESSMR4R_02689 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ARU01984
UniProt:
A0A1Y0EEG6
LinkDB
All DBs
Position
complement(2677983..2680793)
Genome browser
AA seq
936 aa
AA seq
DB search
MAQTFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFVNMLQRYVENNSGAD
AATHVAVIFDKGSHTFRNDMYDQYKANREAMPEELRPQIPLTRDATRAFNIACEEVEGFE
ADDIIATLAHRARRAGGRVTIVSSDKDLMQLVGDGVEMLDPMKNKRIDRDGVFEKFGVYP
DRVVDVQALAGDSVDNVPGAPGIGIKTAALLINAFGDLESLLDRAGEITQPKRRETLVNH
RVQIELSKKLVQLDCDMALDFGLDDLEIRIPDPDTLLAFLAKMEFRTVSKRIADKLGVAA
PVIEAPAPATDIAPTEAVPFDADSYECVRDAAALQVWIDRIVEAGHVAIDTETTNLDEMR
ADLVGISLCVAAGQACYIPLAHKAGADDLFGSDARAEGQMDMAQCLAMLKPVLEDASILK
IGQNMKYDAKIFALLGIDVAPIDDTMLMSYALHAGLHNHGMDTLSERYLGHVPIPIKPLL
GTGKSAVTFDRVPVADAVKYAAEDADVTLRLWQMLKPQLHVNRVTTVYETLERPLVPVLA
QMEMHGIMVDRDTLSRMSNAFAQKMAGLEDEIQKMAGRPFNVGSPKQLGEILFDELGLAM
PDGKTPAKGKTGAYSTGADVLEDLATIHDLPRRILDWRQLAKLKSTYTDALQDHINPDTG
RVHTSYSIAGAITGRLASTDPNLQNIPVRSDEGRRIREAFVAAPGNVIVSLDYSQIELRI
LAHIAGIDALKQAFLDGIDIHAMTASEMFDVPLDQMTPEIRRQAKAINFGVIYGISGFGL
ARNLRIPRSDAQGFIDRYFERFPGIRQYMDDTIAFARDHGYVQTLFGRRINTPEINTKGP
QAGFAKRAAINAPIQGTAADVIRRAMIRMPAAIKDLPAKMLLQVHDELLFEVDASAAEDL
IGVARQVMETASDPAVKLDVKLAVDAGQGPNWATAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaacattcggcaaaggctgtcacctgcatctgatcgacggatcggccttcatc
tttcgcgcctatcatgcgcttccgccgctgacgcgcaagtccgatggtctgccggtcggc
gcggtcagcggttttgtgaacatgttgcaacgttatgtcgaaaataattccggcgcggat
gcggccacccatgtcgccgtgatctttgacaagggcagccacacgttccgcaatgacatg
tatgaccaatacaaagccaaccgcgaggccatgcccgaggaattgcgcccgcagatcccg
ctcacgcgcgatgcgacccgcgccttcaacatcgcctgcgaggaagtcgaggggttcgag
gccgatgatatcatcgccacccttgcccaccgcgcgcgccgcgcggggggccgtgtcacc
atcgtcagttccgacaaggacctgatgcagctggttggcgatggcgtcgaaatgctcgac
ccgatgaagaacaaacgcatcgaccgcgacggggtgtttgaaaaattcggcgtctatccc
gaccgcgtcgtcgatgtgcaggcgcttgcgggcgattcggttgataacgtgccgggcgcg
ccgggcatcgggatcaaaactgccgccctgctgatcaatgcattcggcgatctggaaagc
ctgctggaccgcgcgggcgagatcacgcaacccaagcgccgcgaaacgctggtgaaccac
cgcgtgcagatcgaattatccaagaaactggtccagcttgactgcgatatggcgcttgat
ttcggtctggacgacctggaaatccgcatacccgaccctgacacgctgctggcctttctg
gccaagatggaattccgaacggtgtccaaacggatcgccgataagctcggcgttgccgcc
cccgtgatcgaggcgccggcccccgcgacggacattgccccaaccgaggccgtgcctttc
gatgccgacagctatgaatgcgtccgcgatgccgctgccctgcaggtctggatcgaccgg
atcgtcgaggcgggccatgtcgccatcgacaccgaaaccaccaaccttgacgaaatgcgc
gccgatctggtcggcatctcgctttgcgtggcggcggggcaggcctgctatatcccgctg
gcgcataaggcgggggcggatgacctgttcggctctgatgcgcgggccgaggggcagatg
gatatggcgcaatgcctcgccatgctcaaacccgtgctggaggatgcaagcatcctcaag
atcgggcagaatatgaaatatgacgccaagatctttgcgttgctggggatcgatgtcgcc
cccatcgatgacacgatgctgatgtcctatgcgctgcatgcgggcctgcataatcacggc
atggacacgctgtccgaacgctatctggggcacgtgccaatcccgatcaagccgctgctg
ggcaccggcaaatccgccgtgacctttgaccgggtgccggtcgccgatgcggtaaaatac
gccgccgaggatgccgatgtcaccctgcgcctctggcagatgctcaaaccgcaattgcat
gtgaaccgcgtgaccaccgtctatgaaacgctggaacggccgctggtgccggtgctggcg
cagatggaaatgcacggcatcatggtcgaccgcgatacgctgtcgcggatgtccaatgct
ttcgcgcaaaagatggcggggctggaagacgagatccagaaaatggcaggccgcccgttc
aacgtgggctcgcccaagcaattgggtgaaatcctgttcgatgaattggggctggccatg
cccgatggcaagaccccggccaaaggtaaaaccggtgcctattccaccggggcggacgtg
ctcgaagacctcgccacgatccacgacctgccacggcgcatccttgactggcggcaattg
gcgaaactgaaatcgacctataccgacgcgctgcaggaccatatcaaccccgatacaggg
cgcgtgcatacatcctattccatcgcaggcgcgatcacggggcggctggcctcgaccgat
ccgaacctgcaaaacatccccgtgcgatcagacgaagggcggcgcatccgcgaagctttc
gtcgcggcgccgggcaatgtgatcgtcagccttgattacagccagatcgaattgcgcatc
cttgcgcatatcgcggggatcgacgcgctgaaacaggcgtttctggacgggatcgacatc
catgcaatgacggcgtccgaaatgttcgacgtgccgctggaccagatgacgcccgagatc
cgccgccaggccaaggcgatcaatttcggggtgatctacgggatttcgggctttggcctt
gcgcgcaacctacggatcccgcgcagcgatgcccaaggcttcatcgaccgctatttcgaa
cgcttcccgggcatccggcaatatatggatgacacaatcgcctttgcgcgcgaccacggc
tatgtgcaaacgctgtttggccggcggatcaacacgcccgagatcaacaccaaaggcccg
caagccggtttcgccaaacgggccgcgatcaatgcgccgatccaaggcaccgccgccgat
gtgatccggcgcgcgatgatccgcatgcccgccgcgatcaaggacctgcccgccaaaatg
ctgctgcaagtgcatgacgagctgttgttcgaggtcgatgccagcgccgccgaggacctg
atcggcgtggcgcggcaggtgatggaaaccgccagcgatcctgcggtcaaactcgatgtc
aaattggcggtggatgcgggccaaggcccgaactgggccaccgcgcattaa
DBGET
integrated database retrieval system
