KEGG   Yoonia vestfoldensis: LOKVESSMR4R_02722
Entry
LOKVESSMR4R_02722 CDS       T04854                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
lvs  Yoonia vestfoldensis
Pathway
lvs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOKVESSMR4R_02722 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lvs03019]
    LOKVESSMR4R_02722 (rhlE)
Enzymes [BR:lvs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LOKVESSMR4R_02722 (rhlE)
Messenger RNA biogenesis [BR:lvs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LOKVESSMR4R_02722 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 HEM4
Other DBs
NCBI-ProteinID: ARU02016
UniProt: A0A1Y0EEF0
LinkDB
Position
complement(2703867..2705207)
AA seq 446 aa
MDFDMLGLAPRLIAVLKEQGITDPTPIQTQAIPHAMNGRDVMGLAQTGTGKTAAFGLPMI
HALMKAGVKPNPKAVRGLVLAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGIVAQTKR
LAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDR
QTMMFSATMPKLMSELADAFLTDAVRVQVNPPGQAVKKIAQSVHFVAQAAKTDLLVELLD
KHRDELALVFGRTKHGCEKLYKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVA
TDVAARGIDIPGVRHVYNYDLPNVAENYVHRIGRTARAGAEGSAIALVAPDEMIELQDIE
KAMKEAIPVASGRPWEIMPGQKKRPNGGGGGGRRGGGGGGGGGGGGNRSAAPRAGGKPGG
FSGKPQGGRRQGAGGGAGRSRGKSAA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggattttgacatgctgggccttgcgccccgattgattgccgttctcaaggaacagggc
atcaccgacccaaccccgatccagacgcaggcgatcccgcatgcgatgaacggccgcgac
gtgatggggctggcccagaccggcaccggcaaaaccgcggcctttggcctgccgatgatc
catgcgctgatgaaggcgggtgtaaaacccaaccccaaagccgtgcgcggcctggtgctg
gccccaacgcgcgagctggccaaacagatcgccgacaacctgaccgcctataccaagggc
agccatctgaaggttgctttggtcgtcggcggggcgggtatcgtggcgcagaccaaacgt
ctggcaggtggcgttgacctgctggtcgccacgcctgggcggttgatcgacctgcttgac
cgccgcgcggtgcggctggacgaaacaatctatctggtgctggacgaggcagatcagatg
ctggacatgggcttcatccatgcgctgcgccggatcgccccgctcttggccaaggaccgt
cagacgatgatgttctcggcgaccatgccaaaactgatgtcggaactggcggatgcgttt
ttgaccgatgcggtgcgcgtgcaggtcaacccccccggccaggccgtcaagaaaatcgcc
caatcggtgcatttcgtggcacaggcggcgaaaaccgacctgctggtggaattgctggac
aagcatcgcgacgaattggcgctggtctttgggcgcaccaaacatggctgcgagaagctt
tacaaaacgctggaagccaagggtttcgcggcggcctctatccacggcaataaatcccaa
ggccagcgcgaacgcgcgatcgaggccttcaaggccggcaaggttcgcgtgctggtggca
accgatgtcgccgcccgcggcatcgatattccgggcgtgcggcatgtctataattatgac
ctgcccaatgtggcggaaaactatgtccaccgcattggccgcacggcgcgcgcgggtgcc
gaaggctcggccatcgctttggtcgcccccgatgagatgatcgaattgcaagatatcgaa
aaagcgatgaaagaagcgatccccgtcgcatcgggccgtccatgggaaatcatgcccggc
cagaaaaagcgccccaatggtggcggtggtggcggccgtcgcggtggcggcggcggtggt
ggcggtggcggcggcggtaatcgctctgccgcaccgcgggcgggtggcaagcctggtggt
ttttctggcaagccccaaggcggtcgcaggcaaggtgccggcggtggcgctggccggtcg
cgcggcaaatccgcagcctaa

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