Yoonia vestfoldensis: LOKVESSMR4R_03154
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Entry
LOKVESSMR4R_03154 CDS
T04854
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
Organism
lvs
Yoonia vestfoldensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
DUF4011
AAA_11
DUF3320
AAA_12
AAA_30
AAA_19
SLFN-g3_helicase
Viral_helicase1
DEAD
AAA_16
ResIII
Helicase_RecD
AAA_22
nSTAND3
FtsK_SpoIIIE
DAP3
DUF559
Motif
Other DBs
NCBI-ProteinID:
ARU02437
UniProt:
A0A1Y0EFR6
LinkDB
All DBs
Position
complement(3116166..3120641)
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AA seq
1491 aa
AA seq
DB search
MRFLARDEEDADDEGDSEGLLLSVGDADSSARYQDQFLETRLGQEALQRRLLRLFTDART
SEEEQGFNILYLAMGFLRWYESESSQTLRESPLILLPVELVRDERRATFDLRARDTEIVT
NLPLQERLRADFGFELPEIAEDETFAPEAYFDDLGERIENRTRWSIDRDGMQLGFFSFSK
LLMMRDLEPVQWPEGAFEDHPVLGGLLGGGFERSEPLFGPQEPLDPRLAPSDLLHVVPAD
ASQTRVIEEVRAGRNLVVQGPPGTGKSQTIANIIAGAAHDGKTVLFVAEKMAALSVVHDR
LQKVGLGDLCLEIHSRAANKKVFLEELARTLNAGRAAPEMPEPPDALREARDRLNSVSAL
LHEPVPGYAFTPYRAMAEITRFVGKELPPPRLARDGLAALDDATRRNLADRVAAYADLLE
SSGPRRSHPFAGVGSTSLQPTDLQRLEPELRQVSEAIKQLQLTASDLAVSTSRAEPSSLP
DCLTLRDLLRAAANRPADAQDATAVLLSQASDPRLQEALSAGRAWVEAREAADTRFTEPA
FGISADTLRARLAPGVGSFWARLFGTYRSASKELATVLSGPLPSAPADRLKHVDELVAVQ
RRRKELADEEGWLKEVLGSAWRGERTPFTSLLAQAEWLGRIAAIVPSADAESVDRISAAA
AGEPELTAALDGLASVLDPLVARLAINWPEGDGISLETLGQRIDAMRVALDRFGEWARLT
HLSGELESNGLGSLITMLDVGEISPDKAVDEFLFATAEARWEAARAALPGMNELAYLDRH
ALVEAFRGLEAARLDETRLLVRSKHLAQLPTGAAGQMGFLRGEMAKKRRHRPIRQMMKAA
GQMVQRIKPVLLMSPISIAQYLPPGAAQFDLLVIDEASQVRPEEALGAIARCRQIVVVGD
QKQLPPTSFFDRIAGSDDVELDEEAEEEVRTATATEMESVLTLCEARGLNPAMLEWHYRS
RDPSLIMVNNAEFYDHRLILPPSPVQNDPEYGLAFQRVPGVYTSRSRGTGRPGTNRIEAE
AVAKAVAEHARTRPDLSLGVVAFSKAQSDMLTEVLEVARRQDEILNDFLREGRSEDVFVK
NIENVQGDERDVILISVGYGPAEPNGRLTSMSFGPMNGEGGERRLNVLFSRARTRCVVFC
SFDPNDIDTSRTSRDGPRVLKRFLEFARSGQMAQPQATGELPDSPLESDVADVIERLGYP
CDHQVGAAGFRIDLGVRHPEQPGRYILAVECDGATYHSALWARERDRLRQDVLEGLGWRF
HRIWSTDWFHRRTAEIERLRVALQAAALADGPAFSGANTGGLNAPVAEAVSEPSAEAVLP
PPPELSAPAYVPSNFMMKMRVEPHEAAMNVLVDLVTKIVTSEGPIHRDLVARRVAAAFGK
ARTGGRIQTASDKALGRAVRSGGILMDGDFAVTDAQRDECPVRDRSGEGAPTKADLIPPL
ETRAAAARVIAESGEMPRDDLIVATARILGFAKTGRELHAQIDRALPKRPT
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcctggcgcgagatgaagaagacgctgacgatgaaggtgacagcgagggcctc
ttgctgtccgttggtgacgccgatagttcagcgcgataccaggatcaattcctcgaaact
cggcttgggcaggaagcacttcagcgccgactgctgcggttgttcacggacgcccgcacg
tcagaggaagagcagggcttcaacatcctttaccttgcgatgggttttctgcgctggtac
gaaagtgagagttcgcagaccctgcgcgagtccccactcatcctgcttccggtcgagttg
gtccgagatgaacggcgagcgacgttcgatctgcgcgcgcgtgataccgaaatcgtaacg
aaccttcctcttcaagaacgcttgagggctgatttcgggtttgagttgccagagattgcc
gaggacgaaacattcgctccagaagcctatttcgacgatctgggtgagcgcatcgaaaat
cgaacccgctggtcgatcgatcgcgatggcatgcagctcggctttttttcgttctcgaag
ctcttgatgatgcgagacctggagccagtgcaatggccagagggtgcgttcgaggatcac
ccggttcttggtggacttctcggaggtgggttcgaacgatcagagccacttttcggtccc
caggaaccgcttgatcctcggcttgccccttcggatctgttgcatgtggtcccagcggat
gcgtctcaaacccgcgtcatcgaggaggtgcgtgcggggcgcaatcttgtcgttcagggg
ccgccgggaacaggcaaatcgcagacaattgcgaacatcatcgcgggcgctgcccatgac
ggaaagaccgtgcttttcgtggccgagaaaatggctgcgctgtcggtcgtgcatgaccgg
ttgcagaaagtgggcctgggtgacctatgccttgagattcattcacgcgccgcgaacaag
aaggtattccttgaggaactcgcgcgcacattgaacgctgggcgagcagcgccagagatg
ccggaaccgccagatgcgctgcgcgaggcacgagacaggctgaacagtgtcagcgcgctg
ctgcatgaacccgttcccgggtatgccttcacgccatatcgggcgatggcggaaattacc
cgtttcgtgggcaaggaactgccgccccctaggctggcccgtgacggattggccgctctt
gacgacgcaacccggcgaaatcttgcggatcgtgtggcagcctatgcagatctgcttgaa
tcatccggcccgcggcgaagccatccattcgcgggtgttggatcaacgagcttgcagccg
accgatctgcagcgactagagcccgagttgcgccaagtatcggaagccatcaagcagctg
caactgacggcttcggacttggcggtgtcgacgagtagggctgagccgtcgtcactgccg
gattgcctcaccttgcgagaccttctgcgtgcagcggctaataggccggcagatgcccaa
gacgcgaccgcggttctgctatcgcaagcgagcgatcctcgccttcaggaagccctcagc
gctggccgcgcgtgggtagaggcgcgcgaagcggccgacacgcgttttaccgagccggcg
ttcgggatttcagccgatacgttgcgcgcccgattggcacccggcgtgggttcattttgg
gcacggctcttcggaacctatcgctcggccagcaaagagctcgcgactgtcttgagcggc
cccctgcccagcgcgcctgcagatcgccttaagcatgtcgacgaactcgttgctgttcaa
cgtcgacgaaaagagctggcggatgaggaaggctggctcaaggaggtcctgggctcagcg
tggcgcggcgaacgcacgcctttcacatcgctcctcgctcaggccgaatggctgggacgg
atcgcagcaatcgttccgtccgctgacgctgagagtgttgatcggattagcgctgcagcc
gctggtgaacccgaattgaccgccgctttggatggcttggcctcggtgttggatccgctg
gtggcaaggcttgcaatcaactggccagaaggtgatggcatatcccttgaaacgctgggg
cagcgcatcgacgccatgcgcgtcgcccttgatcgtttcggcgaatgggcccgcctcacg
catctatcaggtgaactggagagcaacggcctcgggtctctgatcacgatgttggacgta
ggtgagatttcacctgacaaggcggtggacgagtttctatttgcaaccgcagaggcacgc
tgggaagcagcccgtgcggcgctcccaggcatgaacgaactcgcctatctggatcgtcat
gcgctcgtggaggcatttcgtggtcttgaggctgcacggcttgatgagaccaggctactt
gttcgctcgaagcacctggcacaactgccaacaggtgctgctgggcagatgggcttcctg
cgcggggagatggcaaagaagcgccggcatcggccgatccgccaaatgatgaaagctgcc
gggcaaatggtgcagaggatcaaaccggtcctgctgatgagccccatctccatcgcgcaa
tatctgccgccgggggccgcgcaattcgacttgctggttatcgacgaggccagccaagtc
cggcccgaagaggcgctgggcgcgattgcgcgttgccgccaaatcgtagtagtcggcgat
caaaagcagcttccgcccaccagcttttttgatcggatcgccggatctgatgatgtggag
ttggatgaggaagccgaggaggaagtccgcactgcgactgcgacggagatggagagcgtc
ttgacgctctgtgaagcccgcggcctcaacccggcaatgctcgaatggcattatcgttcg
cgcgatccatcgctcattatggtcaacaatgcagagttctatgaccaccgtttgatccta
ccgccgtcgccagtgcaaaatgatcctgagtacgggctcgcatttcagcgcgtgcccggt
gtctatacgagccgatctcgcgggacgggtcggcctggcaccaaccggattgaggccgag
gccgtcgcaaaggcggttgcagagcacgcgcgcacccgccccgacctttcccttggggtg
gtcgccttctcaaaggcacaatctgacatgctgacagaggtactcgaagtcgcccggcgc
caagacgaaatcctcaatgacttcttgcgcgaggggcggtcggaggatgtcttcgtcaag
aacatcgaaaacgtgcagggcgacgagcgcgatgtgatcctgatttcggtcgggtacggt
ccggccgagccaaatggtcgcctcacgtccatgtccttcgggcctatgaatggcgagggc
ggcgagcgtcgccttaacgttctcttctcgcgtgccaggacacgctgcgttgtcttctgc
tcgttcgatcccaatgacatcgacaccagtcgaactagtcgcgatgggccgagggtgctt
aagcgctttctcgaatttgcgcggagcggacagatggcccagccgcaggcaacaggcgaa
ttgcctgacagcccgctcgagtctgatgtggctgatgtgatcgagcgtcttggctaccct
tgcgatcatcaggttggggccgctggcttccggatcgatcttggtgtgcggcatcctgaa
cagccgggccgctacatcctcgcagttgaatgtgatggtgccacatatcactccgctctt
tgggcccgtgaacgtgatcgcctgcgtcaggatgtcttggaaggcctcggctggcgtttc
caccggatctggagcaccgattggttccatcgccgtactgctgaaatcgagcgtttaagg
gttgctctccaggctgctgctcttgcagatgggccagcgttttcgggtgcaaatacgggt
ggcctgaacgcgcctgttgcagaagcggtttcagagccatccgctgaggccgtcttgccg
ccaccgcccgagctcagcgcgccagcttatgtgccgtcgaacttcatgatgaaaatgagg
gtggagccccatgaggcggctatgaatgtgcttgttgatctggtgacgaagattgtcact
tcggaaggtccaattcaccgtgatcttgttgctcgccgggtcgctgctgcttttggtaag
gcgaggaccggcggacgcattcagacggcttcagacaaggcactcggtcgtgctgttcgg
tctggtggcattttaatggatggtgatttcgcggtgacagatgcccagcgcgatgagtgc
ccagtgcgggatcggtcaggcgaaggtgctccgactaaggccgatctaatccccccgctg
gagactcgagccgccgctgcgcgcgtaattgcagaaagtggtgaaatgccccgcgatgat
ctgattgtagcaactgcgcgcatccttggctttgccaagactggcagagagctccatgct
cagattgatcgggcattgcctaagaggccaacgtga
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