Yoonia vestfoldensis: LOKVESSMR4R_03296
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Entry
LOKVESSMR4R_03296 CDS
T04854
Name
(GenBank) putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00630
Glyoxylate and dicarboxylate metabolism
lvs00680
Methane metabolism
lvs01100
Metabolic pathways
lvs01120
Microbial metabolism in diverse environments
lvs01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOKVESSMR4R_03296
09102 Energy metabolism
00680 Methane metabolism
LOKVESSMR4R_03296
Enzymes [BR:
lvs01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LOKVESSMR4R_03296
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4
Fer4_9
Fer4_17
Fer4_21
Fer4_10
Fer4_6
Fer4_2
Fer4_Nqo3
Fer4_4
Fer4_16
Fer4_15
Fer4_18
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ARU02569
UniProt:
A0A1Y0EGK7
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All DBs
Position
complement(3263299..3266064)
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AA seq
921 aa
AA seq
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MSDQITFTLDGATVTAAPGQTIWEVANGRGLVIPHLCHKPAPGYRSDGNCRACMVAIDGE
RTLAASCIREPRDGMVVTTNEPREVQARRMVMELLVADQPAQDVAHDRSSHLWDMAGAQG
VADSRFPAKADHIPLLDDSHVAMSVNLDACIQCGLCVRACREVQVNDVIGMAGRGGTAYP
VFDMDDPMGGSSCVACGECVQACPTGALLPATVTDENQMGDTADFDREVASVCPFCGVGC
QVSLKIKDNKVKFVEGINGPANEGRLCVKGRFGFDYIHHPHRLTKPLIRRADAPAKGLNV
DPGNWQQHFREATWDEALDAAANGLQAIGGKGVAGFGSAKCTNEEAYLFQKLIRQGFGHN
NVDHCTRLCHASSVAALMENVGSGAVTATFNQIEHADVAIVIGANPIENHPVAATYFKQF
AKRGGKLIVMDPRGQALKRHASHMLQFRPGADVSMLNAIMHVIVEEQLYDQQYIAAYTEN
WEAEKAHLADFSPEKMAGICGIDAETLRDVARTFAGAKAAMIFWGMGVSQHIHGTDNARC
LISLALMTGQVGRPGSGLHPLRGQNNVQGASDAGMIPMFLPDYQPVGDQGVRTAFQEVWQ
HGEIDATKGLTVTEILDAVHDGDIRAMYILGENPAMSDPDVDHARAALAKLDHLVVQDIF
ITETANFADVILPASAFAEKSGTVTNTNRQVQMGRPAVPPPGDAREDWWITVELAKRLGL
PWTYAHPSDVFGEMTQVMASLTNITWDRLEAQNAVTYPSLTPDDPGQPIVFADAFPRENG
RARFTPASVIAPDETPDADYPMIMTTGRQLEHWHTGSMTRRSRVLDAVEPEANCSLHPST
LRRLGVEPGGMVRLTTRRGSIDIMARSDRAVAPDMVFVPFAYVEAAANILTNPAIDPYGK
IPEFKFAAVRVEKAQSEVAAE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccagatcacttttacccttgatggcgcaaccgtcaccgccgcccccggtcag
accatctgggaggtggcgaacgggcgcggtctggtgatcccgcatctttgccacaaaccc
gcccccggctatcggtccgacggcaattgccgcgcctgtatggtcgccatcgacggcgaa
cgcacgcttgccgcgtcctgcatccgcgaaccgcgtgatggcatggtcgtcaccacgaac
gagccgcgcgaggtgcaggcgcgccgcatggtgatggaattgctggtcgccgaccaaccg
gcgcaggatgtggcgcatgaccggtccagccatctgtgggacatggcgggtgcgcaaggc
gtggctgacagccgttttcccgccaaggcggatcatatcccgctgctggatgacagccat
gtcgcgatgtcggtgaatcttgatgcctgtatccaatgcgggctttgcgtgcgggcctgc
cgtgaagtgcaggtcaatgatgtgatcggcatggcagggcgcggtggcacggcctatccg
gtgttcgacatggatgacccgatggggggatcgtcctgcgtggcttgcggcgaatgtgtg
caggcctgcccgacgggcgcgctgctgcccgcgacggtgacggatgaaaaccagatgggc
gataccgctgatttcgaccgcgaggttgccagcgtctgcccgttctgcggtgtgggctgt
caggtcagtctcaagatcaaggataacaaggtcaaattcgtcgaaggcatcaacggcccc
gcgaatgaagggcggctttgcgtcaagggccgtttcgggttcgattatatccatcacccg
caccgcctgaccaagccgctgatccgccgcgccgatgcgcccgccaaggggctgaacgtc
gatcccggcaactggcagcaacatttccgcgaggcgacatgggacgaggcgctggacgcc
gccgcaaacggcttgcaggcgattggcggcaagggtgtcgcgggcttcggttctgccaaa
tgcaccaatgaagaggcctatctattccagaaactgatccggcaggggttcggccacaat
aacgtcgatcactgcacccggctgtgccacgcgtcatctgtggcggcgctgatggaaaat
gtgggttccggtgctgtcaccgcgaccttcaaccagatcgaacatgctgatgttgccatc
gtgatcggcgccaacccgatcgagaaccaccccgttgccgccacctatttcaagcaattc
gccaaacgcggcggcaagctgatcgtgatggacccgcgcgggcaggcgttgaaacgccat
gcctcgcatatgctgcaattccgccccggtgccgatgtgtcgatgctgaatgcgatcatg
catgtgatcgtcgaggaacagctttacgaccagcaatatatcgccgcctataccgagaat
tgggaggccgaaaaggcgcatctggccgatttcagccccgaaaagatggccggtatctgc
gggatcgatgccgaaacgctgcgcgatgtggcgcgcacctttgcgggggccaaggctgcg
atgattttctggggtatgggcgtcagccagcatatccacggcaccgataatgcgcgctgt
ctgatctcgttggcgttgatgaccgggcaggtcgggcggccggggtcggggctgcatccg
ctgcgcgggcagaacaacgtccaaggcgcgtcggatgccggcatgatcccgatgtttttg
cccgattaccagcccgtcggcgaccaaggcgtgcggactgcgttccaagaggtctggcaa
cacggcgagattgatgccaccaagggcctgaccgtgaccgagattttggatgccgtgcat
gatggcgatattcgggcgatgtatatccttggcgaaaatccggccatgtcggaccctgat
gtggaccatgcgcgcgcggcgcttgccaagctcgaccaccttgtcgtgcaggacatcttt
atcaccgaaaccgccaatttcgccgatgtgatcctgcccgccagcgcctttgccgaaaag
tctggcaccgtgaccaacaccaaccggcaggtccagatgggccgtcccgccgtgccgccc
cccggtgacgcgcgcgaggattggtggatcaccgtggaactggccaagcggttgggcctg
ccctggacctatgcgcatccctccgatgtgtttggcgaaatgacccaagtcatggcgtcg
ctgaccaatatcacctgggaccggctagaggcgcaaaacgccgtgacctatccgtcgctc
acgcccgatgatccgggccagccgattgtctttgccgatgctttcccgcgtgagaatggc
cgcgcgcggttcacccccgccagcgtgatcgccccggatgaaacccccgatgccgattat
ccgatgatcatgaccacgggccgccagctggaacactggcacacagggtcgatgacgcgg
cggtcgcgcgtgctggacgcggtagagccagaggcgaattgttcgctgcatccatccacc
ctgcgcaggctgggcgtggaaccgggcggcatggtccgcctgaccacacggcgcggcagc
atcgacatcatggcgcggtccgaccgcgccgtcgcccccgacatggtcttcgtccccttc
gcctatgtcgaggcggcggcgaatatcctgaccaatcccgcgatcgacccctatggcaag
atccccgaattcaaattcgccgccgtcagggtggagaaggcgcaaagcgaggttgcggcg
gaataa
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