Yoonia vestfoldensis: LOKVESSMR4R_03355
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Entry
LOKVESSMR4R_03355 CDS
T04854
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs03030
DNA replication
lvs03430
Mismatch repair
lvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOKVESSMR4R_03355 (polC)
03430 Mismatch repair
LOKVESSMR4R_03355 (polC)
03440 Homologous recombination
LOKVESSMR4R_03355 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvs03032
]
LOKVESSMR4R_03355 (polC)
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_03355 (polC)
Enzymes [BR:
lvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOKVESSMR4R_03355 (polC)
DNA replication proteins [BR:
lvs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOKVESSMR4R_03355 (polC)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOKVESSMR4R_03355 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
SfLAP
PAS
DUF3413
DEDDh_C
Hint_2
Motif
Other DBs
NCBI-ProteinID:
ARU02628
UniProt:
A0A1Y0EGQ6
LinkDB
All DBs
Position
3326934..3328343
Genome browser
AA seq
469 aa
AA seq
DB search
MLDRLRPRQRTLAFFALLAFGCIAILAAALVLAEARLDQAEARQAFIAAGIIGAFGLLGF
AALMWFVFDDMVVRPMERLAAAMQAHAATDMRNGIDPDMARHLGDLAKGAAALTSRLASA
RAEADANLARYTSKLATEREHLTRILSAIPAAVLMVSPDHRIALYDGHAALMLDDQHHLG
LGQKIFDYFDETYLRAALGNLARSGNATLDQQIPTADGASLLDVSLHNLGRDQGYMLSFP
VPREASPARPVVFDFAMTTRTETRDIQDVPLRDLTYVVFDTETTGFLPNKDEVVQIGALR
VVNGQQAPGEVLDILVNPGRPIPASSTAVHRITDSMVKDAPDMVQAGRRFHSFARDAVLV
AHNAPFDLSFFHRYAPKIGVKFDHPVLDTVLLSAVLFGITEGHTLDELAQRLGIELLDKH
RHTAIGDAIATRDIFLRMIPMLEARGLATFGAVVNEIRKHKRLLPDMNG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccggcttcgcccgcgccagcgcacgcttgctttcttcgccttgctggccttt
ggctgcatcgcgattctggcagctgcgctggtgctggccgaggcccgtctggaccaagcc
gaagcgcggcaggccttcatcgcggcggggatcatcggcgccttcggcctgttgggattt
gccgcgctgatgtggttcgttttcgatgacatggtcgtgcgcccgatggaacggctggcc
gcagcgatgcaagcccatgccgcgaccgatatgcgcaacgggatcgacccggatatggcg
cgccatctgggcgatctggccaaaggcgcggcggcgctgacgtcacggctggcctctgcg
cgcgccgaggccgatgcgaatttggcgcgttacaccagcaagctggcgaccgagcgtgaa
catctgacgcgcatcctgtcggctattcccgcagcggtgctgatggtcagccccgaccac
cggatcgccctttatgatggtcatgccgccctgatgctggacgaccagcaccatctggga
ctggggcaaaagatctttgactatttcgacgaaacctatttgcgcgccgcactcggtaat
cttgcgcgcagcggaaacgcgacgctggaccagcagatccccacggccgatggcgcatca
ctgctggatgtcagcctgcataatctggggcgggaccaaggctatatgctcagctttccg
gtccccagagaggcaagccccgcccgtcccgtcgtcttcgatttcgcgatgaccacgcgc
acagaaacccgcgacatccaggacgtgccgctgcgcgatctgacctatgtggtctttgac
acggaaaccacgggctttttgcccaacaaggacgaggtggtgcaaatcggcgcgctgcgc
gtcgtgaacgggcagcaagcgccgggcgaggtgctggatatcctcgttaatcccggacgg
ccgatcccggccagttcgacggctgtgcaccggatcaccgatagcatggtgaaagacgcc
cccgacatggtgcaggcagggcgcaggtttcacagctttgcccgcgacgcggtgctggtt
gcgcataacgcgcctttcgatctgtcgttctttcaccgttacgcgcccaagatcggggtg
aaattcgatcatccggtgctggatacggtgctgctatccgcagtgctgttcgggatcacc
gaagggcatacgctggacgagctggcccaaaggctgggcatcgaattgctggacaaacac
cgccataccgcgattggcgatgccatcgccacgcgcgatatctttctgcggatgatcccg
atgctcgaagcacgcggattggccacctttggcgcggtggtgaacgagatccgcaagcac
aagcgcctgttgccggatatgaacggctag
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