Yoonia vestfoldensis: LOKVESSMR4R_03641
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Entry
LOKVESSMR4R_03641 CDS
T04854
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00300
Lysine biosynthesis
lvs00470
D-Amino acid metabolism
lvs01100
Metabolic pathways
lvs01110
Biosynthesis of secondary metabolites
lvs01120
Microbial metabolism in diverse environments
lvs01230
Biosynthesis of amino acids
Module
lvs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOKVESSMR4R_03641 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOKVESSMR4R_03641 (dapF)
Enzymes [BR:
lvs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LOKVESSMR4R_03641 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ARU02909
UniProt:
A0A1Y0EHL4
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All DBs
Position
complement(3611478..3612344)
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AA seq
288 aa
AA seq
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MPSRLDMCRGFVYIAAMTQTDHTFLPFRKMHGLGNDFVVVDERGAAPRVTATLAQAIADR
HRGVGFDQLAVISDSATADLHLTFWNSDGSTAAACGNATRCIARLVMDQTGQNALTITTA
RGTLQAKDAGGGLTAVNMGQPQLDWQEIPLCEQMDTLHLPIDGTPVATGMGNPHCTFFVA
DAAAVDLAKRGALIEHHPLFPQRTNVQFASLIGPDHLRMRVWERGVGVTLASGSSSCAVA
VAAARRGLTGRAVTITLDGGDLAIDWREDGVWMTGPTAYVFDGQWRLS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcggctggatatgtgtcggggctttgtttatatcgccgccatgacacaaacg
gatcacacctttctgccctttcgcaagatgcacgggcttggcaacgacttcgtcgtcgtg
gacgaacgcggggcagcgccacgcgtgacggcgacgcttgcgcaggcgattgcagaccgg
catcggggcgtcggatttgaccagcttgcggtgatctctgacagtgccacggccgatctg
cacctgacattctggaacagtgacggatcgaccgccgccgcctgtggcaatgcgacacgc
tgcatcgcgcggctggtcatggaccagaccggacagaatgcgctgacgatcacgacagca
cggggcacattgcaggcaaaggatgcaggcggcgggctgaccgcggtcaacatgggccag
ccacagcttgattggcaggaaattccgctttgtgaacagatggatacgctgcatctgccg
attgacggcacaccggtcgccaccggcatgggcaacccgcattgcacgtttttcgtcgct
gatgccgcggcggtcgatctggccaagcgcggcgcgctgatcgaacatcacccgctgttc
ccgcagcgcaccaatgtccaattcgccagcctgatcggccccgaccatctgcggatgcgg
gtctgggaacggggcgtgggggtgacgctggcctctggctcttcctcttgcgcggtggcg
gtcgcggcggcgcggcgcgggctgaccggccgggcggtgacgatcacgctggacggcggc
gatctggccatcgactggcgcgaggacggggtctggatgacaggaccgaccgcctatgtc
tttgacgggcaatggcggctgtcatga
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