Yoonia vestfoldensis: LOKVESSMR4R_03784
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Entry
LOKVESSMR4R_03784 CDS
T04854
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOKVESSMR4R_03784 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvs03019
]
LOKVESSMR4R_03784 (recQ)
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_03784 (recQ)
Enzymes [BR:
lvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOKVESSMR4R_03784 (recQ)
Messenger RNA biogenesis [BR:
lvs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LOKVESSMR4R_03784 (recQ)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOKVESSMR4R_03784 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARU03049
UniProt:
A0A1Y0EHZ3
LinkDB
All DBs
Position
complement(3741453..3743495)
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AA seq
680 aa
AA seq
DB search
MSAATLLRDVFGFDAFRPGQQDIVEAVAAGRNTLAIMPTGGGKSLCFQLPALMRSGVTVV
ISPLIALMRDQVRGLQQAGVVAGALTSGNTEEETEAVWSALESGTLKLLYMAPERLSAGG
TVQMLQRAGVSLIAVDEAHCVSQWGHDFRPDYLRIGDLREALDVPLAAFTATADAETQAE
IVQKLFAGQQPATFLHGFDRPNIHLAFAAKDSPRAQILTFAAARKGQSGIVYTGTRAKTE
TLAQALREAGHLACHYHGGMEAEDRRIVERRFQQEDGLIVCATVAFGMGIDKPDIRWVAH
ADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRYRRQQIDEGLAPADRRTADHGRLN
ALLGLAEALHCRRQTLLSYFGETSDPCGHCDLCDKPAEVFDATTPVRMALSAALRTEEYF
GAGHLIDILLGQPTDKIKARGHDSLPTYGVGRDYDRRQWQAIFRQMMGHDLLRPDRDRHG
ALRMTDHARPILRGEAQIMLRRDTITAAKGAGPKVHTLVNEDDAPLLSALKAKRRFLAEQ
AGVPAYIIFNDKTLIEMAEKRPATLDDMAQIGGVGAKKLESYGRAFLEVIAGEAENLHPS
RRKLAGRDEGRIYDRLLAAQSALIRGPHGADKPMTCSASMLAKVAQLRGADINSLTRLIG
DRHAERFGDAFLDVLHTTEP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgccacgcttttgcgcgatgtctttggctttgacgccttccggcccggccag
caggacatcgtcgaggctgtcgccgccgggcgcaatacgctggcgatcatgcccacgggg
ggcggcaaatcgctctgcttccagctgcccgcgctgatgcggtccggcgtgacagtggtg
atttccccgctgatcgccctgatgcgtgatcaggtgcgcgggttgcagcaggcgggcgtt
gtcgcaggtgcgctgacatcgggcaataccgaggaagaaaccgaggcggtgtggtccgca
ctggaatccggcacgctgaaacttttgtacatggcgcccgaacgtttgtccgccggtggc
accgtgcagatgctgcagcgcgccggtgtcagtctgatcgccgtggacgaggcgcattgc
gtcagccagtggggccatgatttccgccccgattacctgcgtatcggcgacttgcgcgaa
gcactggatgtgccgctggcggcctttaccgccacggcggatgccgaaacacaggccgag
attgtccagaaattgtttgcaggccagcagcctgcgacattcctgcacgggttcgaccgg
cccaatatccaccttgcctttgccgccaaagacagcccgcgcgcgcagatcctgaccttt
gccgccgcgcgcaagggtcagtcgggcatcgtctatacaggcacccgcgccaagaccgaa
accttggcccaggctttgcgcgaggccgggcatctggcctgtcattaccacggcgggatg
gaggccgaggaccgccgcatcgtcgaacgccggttccagcaggaagacggcttgatcgtc
tgtgccaccgtcgcctttggcatgggcatcgacaaacccgatatccgctgggtcgcccat
gccgatctgcccaaatcgatcgaggcctattatcaggaaatcggccgcgcgggccgtgac
ggcgcgcccgcggaaacgctgacgctctttggtcccgacgacatccgctatcgccgccag
cagatcgacgaagggctggcccccgccgacaggcgcaccgccgatcatggccgcctgaac
gcgctgctgggtctggccgaggcgctgcattgccgccgccagacgcttctgtcctatttc
ggggaaacgagcgatccctgcggccattgtgatctttgcgacaaacccgccgaggtgttc
gacgccacgacccccgtgcgcatggccctgtcagcggcgctgcggaccgaggaatatttc
ggcgcaggccatctgatcgacatcctgctgggccagcccaccgacaagatcaaggcgcgc
ggccatgacagcctgcccacctatggcgtggggcgcgattacgaccgccgccagtggcag
gcgattttccggcagatgatgggccacgacctgctgcgccccgaccgcgaccggcatggg
gccttgcgcatgaccgaccatgcccgcccgatcctgcgcggcgaggcgcagatcatgctg
cgccgcgacacgatcactgccgccaaaggtgccgggccgaaagtgcataccctggtcaat
gaagacgatgcgccgcttttatccgcgctgaaggccaaacgccggtttctggccgaacag
gcgggcgtgccagcctatatcatctttaacgacaagaccctgatcgagatggccgagaaa
cgccccgcaacgctggacgatatggcccagatcggcggggtcggcgcgaaaaagctggaa
agctacgggcgcgccttcctcgaggtgatcgcgggcgaggcggaaaacctgcaccccagc
cgccgcaaactggccggccgtgacgaaggccggatctatgaccgcctgctggccgcgcaa
agcgcgctgatccgtggcccgcatggtgccgacaagccgatgacctgttcggcatccatg
ctggcaaaggtcgcgcaattgcggggtgccgatatcaacagcctgacgcggctgatcggc
gaccgccacgccgaaaggttcggcgatgcctttctggacgtgctgcacaccaccgaaccc
tag
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