Yoonia vestfoldensis: LOKVESSMR4R_03940
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Entry
LOKVESSMR4R_03940 CDS
T04854
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00071
Fatty acid degradation
lvs00362
Benzoate degradation
lvs00650
Butanoate metabolism
lvs01100
Metabolic pathways
lvs01120
Microbial metabolism in diverse environments
lvs01200
Carbon metabolism
lvs01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LOKVESSMR4R_03940 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LOKVESSMR4R_03940 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LOKVESSMR4R_03940 (fadB)
Enzymes [BR:
lvs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LOKVESSMR4R_03940 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
Pyr_redox
FAD_binding_3
Pyr_redox_2
F420_oxidored
NAD_binding_8
ApbA
TrkA_N
NAD_binding_2
PALP
Pyr_redox_3
Shikimate_DH
NAD_binding_7
adh_short
FAD_binding_2
2-Hacid_dh_C
XdhC_C
Thi4
NAD_Gly3P_dh_N
YjeF_N
GIDA
Motif
Other DBs
NCBI-ProteinID:
ARU03163
UniProt:
A0A1Y0EHP9
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All DBs
Position
pSMR4r-1:16979..19018
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AA seq
679 aa
AA seq
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MPVELSFSNGAAILTIDNSPLNLINAEVRAGIQHCIFQVLETGATRLIITGAGTTFVAGA
DAKEFGQLPVDPQLNDVLLQLAHLPIPTIAAINGAALGGGLEIALACCYRIASTSTKLGL
PEVNLGIVPGAGGTQRLPRLIGIEAALDMIVTGKAVSAEQALKIGLIQLLADDPLGAAIA
LDDAVLEAAQAPDNLPSPMPNHFAAEVARAQVARRMPGQNAPHVAVDLVAASAMTPLHDA
LASERAAFLDLRASDQARALRHVFFTERTATNKGRTYPRPSRDAETAIVVGGGNMGAAIA
YTLATAGISVTVVERSASSAEWARENLQKLIDQGISRGILSPDAGKAVEDRLVTVSGYDA
LPPTDLAIEAAFEDFAVKSAILTELEGALPPETIIATNTSYLDVNRLSDGLKHPARFVGI
HFFSPAHIMKLLEVVRSDRTSDDTLGAAFVLARRLGKIPVLSGVCDGFIGNRILSSYRHA
ANRLLVKGAIVDEIDAAMRGFGMAMGPYAAQDMSGLDIAYANIRRKAAAEGNCCGHVPLV
ERLVEKHKRLGHKSGAGWYDYGPDGEPSPSELVASEILRVSEEMNFTRREFSADEIVERL
LLAMVAEACDILDEGIAEKPQDIDLVMIHGYGFPRWRGGLMHHAKNIGKDRLAALFSALV
KEDPCDWRVPRYLERVFAT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgaattaagcttctcaaatggcgcagcaattctgaccatagacaattcgccg
cttaacctaatcaacgcggaggttcgggctggaatacaacactgtatcttccaagtcctc
gaaactggtgctaccaggctgattatcaccggcgcaggaacgacgttcgtcgcgggcgcg
gatgcgaaggaattcggacagttgcctgttgatccacaactaaatgacgtgctgttgcaa
cttgcgcaccttccgattccgactatcgcagccatcaacggggctgcgcttggtggggga
ctagagattgctctggcttgctgctatcgaatcgcctcaacttctaccaaactgggcctg
ccagaggtaaacttggggatcgtgcctggcgcagggggaacccaaagactgccgcgactt
atcggtattgaagctgcgcttgacatgatcgtcaccgggaaggctgtttccgccgagcag
gcactgaaaataggactgatccagctgctagccgatgacccgcttggcgcggccatagct
ctcgatgacgctgttctagaggcggcacaggcacccgacaatcttccttcaccaatgcca
aaccacttcgcagcggaagtcgcccgcgcgcaggtagcgcggcgtatgcctggccagaat
gcgccgcatgttgcggtggacctggtcgcggccagcgcgatgacgccgctgcacgacgca
ctggccagcgagcgcgctgcgtttttggaccttcgtgcctcggatcaggcgcgggccctt
aggcacgttttcttcaccgagcgaaccgcaaccaacaaggggcgcacctacccccgacct
tcccgagatgctgaaaccgccatcgtggtcggtggtggcaatatgggagcagctattgcg
tacacgctagcgaccgcagggatctcggtgactgtcgtcgaacgcagtgcctcgtccgca
gagtgggccagagaaaacctgcaaaagctgattgatcagggtatcagtcgcggcattctg
tcccccgatgcgggaaaggcggttgaggaccggctggttacggtctcaggctatgacgct
ctgccaccaaccgatctagcaatcgaggcggccttcgaggattttgcggtcaagagcgcg
atcttgaccgaactcgaaggtgctctgccgcccgagacgattattgccacaaacacatcc
tatctcgatgtaaatcggctttctgatgggttgaagcacccagcacgctttgtagggatt
catttcttcagtcctgcgcatattatgaagcttctggaagtcgtcaggagcgaccgaacg
tcagacgatacattaggtgcagcatttgtgctggcgcgcaggcttggtaaaatcccggta
ctgtctggtgtttgcgatggcttcatcggaaaccgaattttgtctagctaccgtcacgcc
gctaatcgccttctggtgaagggggctattgtcgacgagatcgacgcggctatgcgcgga
ttcggtatggcgatgggtccatatgctgcacaggacatgtcggggctggacatcgcctac
gcgaatatccgtcgcaaggccgctgcagaagggaactgctgtggtcacgtgcccttggtc
gagcggttggtcgaaaagcacaaacgcctaggacacaaatcgggcgccggatggtacgac
tatgggccggacggcgaaccctcaccttcggagctggtcgctagcgaaatactccgtgtc
tcagaagaaatgaacttcactcgccgggagttctcagctgacgaaatcgtagaaaggctc
ttgctcgcaatggtggcggaagcctgtgatatccttgacgaaggcatcgcagaaaaaccg
caagacatcgacctagtaatgattcacggctacggatttccccgctggcggggaggcctg
atgcaccacgccaaaaatatcggcaaggatcggttggccgcgctctttagcgcgcttgtc
aaagaggatccttgcgactggagggtgcctcgttatttagaaagggttttcgcgacctga
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