Legionella waltersii: SAMEA4504053_1195
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Entry
SAMEA4504053_1195 CDS
T06599
Symbol
recQ
Name
(GenBank) Superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lwa
Legionella waltersii
Pathway
lwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504053_1195 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwa03019
]
SAMEA4504053_1195 (recQ)
03400 DNA repair and recombination proteins [BR:
lwa03400
]
SAMEA4504053_1195 (recQ)
Enzymes [BR:
lwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4504053_1195 (recQ)
Messenger RNA biogenesis [BR:
lwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4504053_1195 (recQ)
DNA repair and recombination proteins [BR:
lwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4504053_1195 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
SNV01826
LinkDB
All DBs
Position
1:complement(1243800..1245626)
Genome browser
AA seq
608 aa
AA seq
DB search
METLAQPRTTNKTAISVLKDYFGFDSFRNPQEEIINEVISGQDVLVLMPTGGGKSLCYQI
PAIVRPGVGIVVSPLIALMEDQVAALKLQGINAAYYNSSLNSEEARQVLAQLHNNELDLL
YIAPERLISAAFLERLKECTIALFAIDEAHCISQWGHDFRPEYASLGLLKTHFPTVPIIA
LTATADKQTREDIVIKLKYSPKRFIASFNRPNIHYKVLAKSNSYKQLDNFLQNDTQQSGI
IYCGTRNSVESVASKLQEMGYKARAYHAGLSHHERREVQTLFRYDQIDIVVATIAFGMGI
DKPNVRFVIHFDLPKNIESYYQETGRAGRDGLAAQALLLYNAADSARLRAWIHAMPNEDQ
QRIENNKLNHMLAFAEASHCRRQILLRYFDEVSNEQCKYCDVCDNPPTTEDVTEDAQKLL
SCIYRLRQNYGLGHTIDVLRGSSSDKIKQVGHDRLSTFGIGKDKSANYWKHLAWQLIHKE
YCIQDTEHFNVLKLTAKAVPILKGQERIHLTIPVNDISGSKKKRKERPVIHSESSPLFET
LRSLRRKLAEEENKPPFMIFSDATLHDMVQIKPQTLEKMLDVSGVGQHKLAHYGEQFLEA
LNSHSESE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttagcgcaacctagaacaacaaataaaaccgctatatctgttttaaaagac
tattttggttttgattcattcaggaatcctcaagaggaaatcatcaatgaggtaatttct
ggacaagatgtattggttttgatgccaacgggtggtggtaaatcactctgctatcaaatc
ccagctattgtgcgtcctggagttggaattgtcgtctcaccgttaatcgcattgatggag
gaccaggttgctgcattaaaattacaaggaatcaatgcggcttattacaattcttcatta
aatagcgaggaggctagacaagtcttagcacagttgcataataacgaacttgatttactg
tatatagccccagaacgattaattagtgcagcgtttttagagcggttaaaagaatgcacg
attgctctatttgctattgatgaagcgcattgtatttcgcaatggggtcatgactttcga
cctgagtatgcttctctaggccttctcaaaactcacttccctacagtaccaatcattgcc
cttaccgcaacagcagataaacaaacgcgagaagacattgtcatcaaattaaaatactca
ccaaagcgatttattgcttcgtttaatagacccaatatccattataaagtcctcgcaaaa
agcaattcctataaacaattggataactttttacaaaacgacactcaacaatccggcatt
atttattgtggaacaagaaacagtgtagaatctgtagcaagtaagttgcaggagatgggg
tataaagcaagggcttaccatgcagggctgtctcaccatgaacgtagagaggtgcaaact
ctttttcgttatgaccaaattgatattgttgttgctactatcgctttcggcatgggcata
gataaaccaaacgtccgcttcgtcattcactttgatttacccaaaaacatagaaagttac
taccaagaaacaggccgcgcaggaagagatggtttagctgcgcaagcacttctactgtac
aacgctgcggacagcgcaaggttgcgagcatggattcatgccatgcctaatgaagatcaa
caacgaatagaaaacaacaagctcaatcatatgcttgcttttgctgaagcatctcattgc
agaagacaaatattgttacgttacttcgatgaggtttccaatgaacaatgcaagtattgt
gacgtctgtgataacccgcctacaacagaagatgttacggaagatgctcaaaaattgttg
tcctgcatttaccgcctacgacaaaattacggtctaggtcatactatagacgtattaaga
ggcagttcatctgataaaattaaacaagttggccatgaccgactaagtacttttggaatt
ggaaaagacaaatccgctaactattggaagcacttagcctggcaactcattcataaagaa
tactgtatacaggatacagagcattttaatgtgttaaagctcacagcaaaagctgtccct
attctcaaaggacaagaacgcatccatttaacgattccagtgaatgacatcagtggttcc
aaaaagaaaaggaaagaacgtccggtaatccattctgaaagcagtcctctctttgagaca
ttgcgtagtttaagacgtaagttagctgaagaagaaaataaaccaccgtttatgatattt
agtgatgcaaccttgcatgatatggtgcagattaaacctcaaacactggaaaaaatgctt
gatgtctccggtgtaggacaacataaacttgcacactatggggaacaatttctagaagcc
ttaaatagccattctgaatcggagtaa
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