KEGG   Legionella waltersii: SAMEA4504053_1195
Entry
SAMEA4504053_1195 CDS       T06599                                 
Symbol
recQ
Name
(GenBank) Superfamily II DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lwa  Legionella waltersii
Pathway
lwa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lwa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAMEA4504053_1195 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lwa03019]
    SAMEA4504053_1195 (recQ)
   03400 DNA repair and recombination proteins [BR:lwa03400]
    SAMEA4504053_1195 (recQ)
Enzymes [BR:lwa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAMEA4504053_1195 (recQ)
Messenger RNA biogenesis [BR:lwa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SAMEA4504053_1195 (recQ)
DNA repair and recombination proteins [BR:lwa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SAMEA4504053_1195 (recQ)
SSDB
Motif
Pfam: RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII PG_binding_2
Other DBs
NCBI-ProteinID: SNV01826
LinkDB
Position
1:complement(1243800..1245626)
AA seq 608 aa
METLAQPRTTNKTAISVLKDYFGFDSFRNPQEEIINEVISGQDVLVLMPTGGGKSLCYQI
PAIVRPGVGIVVSPLIALMEDQVAALKLQGINAAYYNSSLNSEEARQVLAQLHNNELDLL
YIAPERLISAAFLERLKECTIALFAIDEAHCISQWGHDFRPEYASLGLLKTHFPTVPIIA
LTATADKQTREDIVIKLKYSPKRFIASFNRPNIHYKVLAKSNSYKQLDNFLQNDTQQSGI
IYCGTRNSVESVASKLQEMGYKARAYHAGLSHHERREVQTLFRYDQIDIVVATIAFGMGI
DKPNVRFVIHFDLPKNIESYYQETGRAGRDGLAAQALLLYNAADSARLRAWIHAMPNEDQ
QRIENNKLNHMLAFAEASHCRRQILLRYFDEVSNEQCKYCDVCDNPPTTEDVTEDAQKLL
SCIYRLRQNYGLGHTIDVLRGSSSDKIKQVGHDRLSTFGIGKDKSANYWKHLAWQLIHKE
YCIQDTEHFNVLKLTAKAVPILKGQERIHLTIPVNDISGSKKKRKERPVIHSESSPLFET
LRSLRRKLAEEENKPPFMIFSDATLHDMVQIKPQTLEKMLDVSGVGQHKLAHYGEQFLEA
LNSHSESE
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggaaactttagcgcaacctagaacaacaaataaaaccgctatatctgttttaaaagac
tattttggttttgattcattcaggaatcctcaagaggaaatcatcaatgaggtaatttct
ggacaagatgtattggttttgatgccaacgggtggtggtaaatcactctgctatcaaatc
ccagctattgtgcgtcctggagttggaattgtcgtctcaccgttaatcgcattgatggag
gaccaggttgctgcattaaaattacaaggaatcaatgcggcttattacaattcttcatta
aatagcgaggaggctagacaagtcttagcacagttgcataataacgaacttgatttactg
tatatagccccagaacgattaattagtgcagcgtttttagagcggttaaaagaatgcacg
attgctctatttgctattgatgaagcgcattgtatttcgcaatggggtcatgactttcga
cctgagtatgcttctctaggccttctcaaaactcacttccctacagtaccaatcattgcc
cttaccgcaacagcagataaacaaacgcgagaagacattgtcatcaaattaaaatactca
ccaaagcgatttattgcttcgtttaatagacccaatatccattataaagtcctcgcaaaa
agcaattcctataaacaattggataactttttacaaaacgacactcaacaatccggcatt
atttattgtggaacaagaaacagtgtagaatctgtagcaagtaagttgcaggagatgggg
tataaagcaagggcttaccatgcagggctgtctcaccatgaacgtagagaggtgcaaact
ctttttcgttatgaccaaattgatattgttgttgctactatcgctttcggcatgggcata
gataaaccaaacgtccgcttcgtcattcactttgatttacccaaaaacatagaaagttac
taccaagaaacaggccgcgcaggaagagatggtttagctgcgcaagcacttctactgtac
aacgctgcggacagcgcaaggttgcgagcatggattcatgccatgcctaatgaagatcaa
caacgaatagaaaacaacaagctcaatcatatgcttgcttttgctgaagcatctcattgc
agaagacaaatattgttacgttacttcgatgaggtttccaatgaacaatgcaagtattgt
gacgtctgtgataacccgcctacaacagaagatgttacggaagatgctcaaaaattgttg
tcctgcatttaccgcctacgacaaaattacggtctaggtcatactatagacgtattaaga
ggcagttcatctgataaaattaaacaagttggccatgaccgactaagtacttttggaatt
ggaaaagacaaatccgctaactattggaagcacttagcctggcaactcattcataaagaa
tactgtatacaggatacagagcattttaatgtgttaaagctcacagcaaaagctgtccct
attctcaaaggacaagaacgcatccatttaacgattccagtgaatgacatcagtggttcc
aaaaagaaaaggaaagaacgtccggtaatccattctgaaagcagtcctctctttgagaca
ttgcgtagtttaagacgtaagttagctgaagaagaaaataaaccaccgtttatgatattt
agtgatgcaaccttgcatgatatggtgcagattaaacctcaaacactggaaaaaatgctt
gatgtctccggtgtaggacaacataaacttgcacactatggggaacaatttctagaagcc
ttaaatagccattctgaatcggagtaa

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