Legionella waltersii: SAMEA4504053_1770
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Entry
SAMEA4504053_1770 CDS
T06599
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lwa
Legionella waltersii
Pathway
lwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504053_1770 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwa03019
]
SAMEA4504053_1770 (pcnB)
Enzymes [BR:
lwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SAMEA4504053_1770 (pcnB)
Messenger RNA biogenesis [BR:
lwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMEA4504053_1770 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
SNV05329
LinkDB
All DBs
Position
1:1860753..1862033
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AA seq
426 aa
AA seq
DB search
MNEAFVVPRNKHTISKADISNNAIKVLNRLISNGYQAYIVGGSVRDLLLHKAPKDFDIAT
NATPSEVKALFKNGRVIGRRFKLVHILFHREIIEVATFRGSDEMDEDHQSNERGMIVRDN
VYGSFDEDAWRRDFTINSLYYNIEDSSIVDFTGGVKDIQQKTIRVIGDPTKRYKEDPVRM
LRAIRFAAKLHFNLSKESEAPLPEYSHLITHVSSSRLFDEMTKLYQCGEAETVQQLLVKY
GLFQYLFPQTTELFNSKYPLNPLLGIALENTDTRIRDDKPVTPAFIFAVILWFPMIDYSK
KLQATGLPPLPSIEKAMSHVIAEQNKIVSIPKRYSQVIREIWLLQYRFEKRQGNRAYHLL
SHSRFRAAYDFMALRALAGDEAMELAQWWTTFQEVDDTEKGKMLALLTPNSPSKKRKRRK
PKPAST
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaagcttttgtagtaccaagaaacaaacacactatttcaaaagcagatataagt
aataatgcgataaaagttcttaaccgtctaatcagcaatggatatcaagcctatattgta
ggcggtagtgttagggatttattattacataaagcgcctaaagactttgacattgctaca
aatgccacacctagtgaggttaaagcactattcaaaaatggacgggtgattggacgacgc
tttaagctagtgcatatattattccatcgtgaaattattgaagttgccacattccgtgga
agtgatgaaatggatgaggaccatcaatccaatgagcgaggaatgattgttagagataat
gtatatggctcctttgatgaagatgcctggcgaagggactttacaataaattccctctat
tacaacatcgaagattcatcaatagttgattttactggtggtgtaaaagatattcagcaa
aaaacaatacgtgtcataggggatcccaccaaacgttataaagaggatccagttcgtatg
ttacgtgctattcgctttgctgcaaagcttcattttaacttatcaaaagaatcagaagcc
cctttaccggagtacagtcacctgataactcacgtctcaagctcaagactttttgatgaa
atgacaaaactctatcaatgcggagaagcagaaacagtccaacaattgcttgtaaaatat
ggcttattccaatatctgtttccgcaaacaaccgaactatttaactctaaatatcctcta
aatcctttactaggtattgctttagaaaatacagatactcgcattagagatgataaaccc
gttactccagcgtttatctttgctgttatactctggttcccaatgatagattattccaaa
aaattacaagctacaggcttaccaccactcccgtcaattgaaaaggccatgtctcatgtg
attgctgaacaaaacaaaatagtatctatccctaagcgttacagccaagtcattagagaa
atttggttattgcaataccgatttgaaaaaaggcagggaaatagagcttatcatcttctc
tcacactcaagatttagagcggcttacgattttatggcattaagagcccttgcaggtgat
gaagcaatggagctggctcaatggtggacaacattccaggaagttgacgatactgaaaaa
ggaaaaatgttagcattattaacacctaactcaccctcaaagaaaaggaagcgtcgtaaa
cccaaaccagcctcaacatga
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