Legionella waltersii: SAMEA4504053_2584
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Entry
SAMEA4504053_2584 CDS
T06599
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lwa
Legionella waltersii
Pathway
lwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504053_2584 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwa03019
]
SAMEA4504053_2584 (deaD)
03009 Ribosome biogenesis [BR:
lwa03009
]
SAMEA4504053_2584 (deaD)
Enzymes [BR:
lwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAMEA4504053_2584 (deaD)
Messenger RNA biogenesis [BR:
lwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4504053_2584 (deaD)
Ribosome biogenesis [BR:
lwa03009
]
Prokaryotic type
rRNA helicases
SAMEA4504053_2584 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Utp25_C
AAA_19
NMT1_2
Cas3-like_C_2
adh_short
SUa-2TM
AAA_22
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
SNV09736
LinkDB
All DBs
Position
1:complement(2749073..2750791)
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AA seq
572 aa
AA seq
DB search
MNQSITNFEAFHLSDALNKALEDMKFTTPSPIQAQTIPLMLQGRDAIALAQTGTGKTAAF
ALPILQNLSVELRGTQALILAPTRELAIQVAEQFELLSRYQPGVTIAVLCGGQEYGRQLK
QLRSGAQIVVGTPGRILDHIDKGSLQLNNLRTFILDEADEMLRMGFIEDVETILEKLPEQ
KQMALFSATMPYRIREIANTYLNSPASIEIRMETATVKSVEQRFLFAAGHQKLDALVRVL
EVEDYQGVIVFVRTKSSTEEVANFLQEQGLRAMAIHGDITQSLRERIIAQFKQGAIDVLV
ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTVLFVTPKESRLISSI
ERHTRQRIEKIQVPNDHTIQLARQKRFMNSISARLEHEHLFSYKRIVEEYIKEHEVSGVD
VAAALALLLHKDAPWKKELNLAKTSSRSSRHDDNRERKQDRNSDKRMRFSEDKKSFSKDR
KKSTDSKQKLPTDAHDQDLFRLDVGRVHGVKPGNIVGAIANEAGLQSRFITGLKIHEDHS
TVRLPKGMPKEVMKDLMKAWVCGRQLNLTLIS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatctataacaaacttcgaagcatttcacctatcagatgctttaaataaagct
ctagaggatatgaagtttactaccccttcccctattcaagctcaaactatccccttaatg
ttgcagggaagagatgcaattgctcttgctcaaactggtactggtaaaaccgctgctttt
gctttgcccattttacaaaatttgtcagttgaattaagaggtacacaagctttaatttta
gcgccgactagggagctagcaattcaggttgctgaacaatttgaattacttagtcgctat
cagcctggtgtaaccatcgctgtattgtgtggtggacaagagtatggccgccaattaaag
caattacgcagtggagcacaaattgttgttggaactcctggaaggatacttgatcatatc
gataaaggaagcttgcaactaaataatctacgtaccttcattcttgatgaagcagacgaa
atgttacgcatgggatttatagaagacgtagaaacaatcttggaaaaattgcctgagcaa
aagcaaatggccttgttttcagcgaccatgccataccgaattcgcgaaattgctaacact
tatttgaacagtcccgcctctattgaaatccgcatggaaacagcaactgtgaagagcgtt
gaacaacgtttcttgtttgccgcaggccatcaaaaattagatgcattggttcgtgtatta
gaagtagaagactatcaaggggtaattgtatttgttcgcacaaagagcagtacagaagaa
gtcgctaattttttacaagaacaaggcttaagggcaatggcgattcatggtgacattacc
caatccctgcgggaaagaattattgctcaatttaagcaaggagcaattgatgtcttagta
gcaaccgatgttgctgcccgtggcttagatgttgagagagtgacccatgtcatcaattac
gacatgcctcatgataatgaaacttatgtgcatcgaattggccgaacaggtagggccggg
cgttctggagtaactgttctgtttgttactcctaaagagtctcgcttaatttctagtatt
gagcgccatactcgacaacgcattgaaaaaatccaagttcctaatgatcacactattcaa
ttggctcgtcagaaacgatttatgaacagcatcagtgcacgtttggaacatgaacatctt
ttttcttataagcgaattgtcgaagagtatattaaagagcatgaggtttctggggtagac
gttgcagctgcactagctttgttattgcacaaagatgcgccttggaaaaaagagttaaac
ttagcaaaaacctcttctcgttcatcacgtcacgatgataatcgagagcgtaagcaggat
cgaaattccgataaacgaatgcgcttctcagaggataaaaagagcttctcaaaggacaga
aaaaaatcaaccgacagtaagcaaaagcttcctacagatgcacatgatcaagatttgttt
cgcttggatgttggcagagttcatggcgttaaacctggaaatattgtaggtgcgattgcc
aatgaagcaggcttacagagtcgtttcatcacaggtcttaaaattcatgaagaccattca
accgttcgcttaccgaaaggcatgcccaaagaagtcatgaaggacttgatgaaagcttgg
gtttgtgggcgtcaattgaatttaactctaatcagctag
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