Leptotrichia wadei: JCM16777_0191
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Entry
JCM16777_0191 CDS
T06741
Name
(GenBank) beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lwd
Leptotrichia wadei
Pathway
lwd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM16777_0191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwd03019
]
JCM16777_0191
Messenger RNA biogenesis [BR:
lwd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JCM16777_0191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Asparaginase_C
Lactamase_B_6
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBM41964
UniProt:
A0A7U6QXS3
LinkDB
All DBs
Position
194078..195949
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AA seq
623 aa
AA seq
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MSEKEKGEFGNQILKRNFSKKEDINKIKSGMKRFRRKSTNRRHLDEKNEIRYIPRVNDRN
RHIDRKVDGKEEKMYVIPLGGLEEVGKNMTAFQYKDEIIVVDAGLTFPEDEHLGIDVIIP
DFSYLESNRHKIKGLLLTHGHEDHIGAIPYFYQKLGTENIPMYGGRLTLALARAKFEKKD
AKLPKEKVISGRTILKVSKYFTVEFVSVTHSIADCYAICIKTPAATILHSGDFKVDLTPV
DGEGFDFGRLAQLGEEGVDLLLSDSTNAQIPGFTPSERTVGESLKDEFAKAKGRIILAAF
ASHVHRLQQIVNIATKHGRKIAIDGRSMVKIFEICSNLGYLKIPRDTMIDIDKVETYPAN
KVLILCTGTQGEPLAALSRIANGTHKHISLREGDTVVISATPIPGNEKAATKNINQLMKR
DANVVFEKGIGIHVSGHGCQEEQKLMINLVKPKYFLPVHGEYAMIKKHKELAMAVGIPEK
NVILTENGAKLELSKNSFRSVGRVPSGATFIDGFGIGDVGNAVLKDRQNLADDGIVIITI
SQYRNGKFNRQIELVTRGFVYNKDAESLLSETKKLVRTELANMENEGIKEIGKIKQKIRA
KVGEFLNKETDREPIILPIIMEV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaggaaaaaggcgagttcggtaatcaaatcttaaaaagaaatttttccaag
aaggaagatattaataaaataaaatctggaatgaaaagatttagaaggaaaagtacgaat
cgaagacatttagatgaaaaaaatgaaatacgttatattccaagagtaaatgataggaat
agacatatagacagaaaagtggatggaaaagaagaaaaaatgtatgtaatcccacttgga
ggtcttgaagaagttggaaaaaatatgacagcttttcaatacaaggatgaaattattgtg
gtggatgctggtcttacatttccagaagatgagcatttgggaatagatgttataattcct
gatttttcatatctggaatcaaaccgtcataaaataaagggacttttattgacgcacgga
catgaagatcatataggggcaatcccttatttttaccaaaagttagggacagaaaatata
ccaatgtacggtggaagattaacacttgcacttgcaagggcaaaatttgaaaaaaaggat
gcaaaattaccaaaagagaaggttattagcggaagaactattttaaaggtgtcaaaatat
tttacggttgagtttgtaagtgtaacacacagtatagcagactgctatgcaatttgcatt
aagactcctgcagcaactattttacattctggagattttaaggttgatttgacgcctgtt
gatggggaaggatttgactttggaagattggctcagctgggagaagaaggagtggatctt
ttgctttcagatagtacaaatgcacaaataccaggatttacgccatctgaaagaacagtt
ggagaaagtttgaaggatgaatttgcaaaggctaagggaagaataattttggcagctttt
gcttcacacgttcacagattgcagcaaattgtaaatattgcgacaaaacatggaagaaaa
attgcaattgacggaagaagcatggtaaaaatctttgaaatatgttcaaatcttggatat
ttaaaaataccgagagatacaatgattgatattgacaaagttgaaacctatccagcgaat
aaggtgcttatattatgtactggaacacagggagaaccgcttgcggcactttccagaatt
gcaaacgggacacacaagcatatttcattaagagaaggagatacagttgtaatttctgca
acacctattcctggaaatgaaaaagctgctaccaaaaatataaatcagcttatgaaacgg
gatgcaaatgttgtttttgaaaaaggaattggaatacacgtatcaggacatggctgccag
gaagaacaaaaattgatgataaatcttgtaaaacctaaatattttctgcctgtgcatggg
gaatatgcaatgattaaaaaacataaggaattggcaatggcagttggaatacctgaaaaa
aatgttattttgacagaaaatggagcaaaattggaattgtctaaaaatagtttcagatct
gttggaagagtgccgagcggggctacatttattgatggatttggaattggcgatgttgga
aatgctgtgctgaaggatagacaaaatctggcagatgatggaattgtaattattacgatt
tctcaatatagaaatggaaaatttaataggcaaatagagcttgtaacacgtggatttgtg
tataataaggatgcggaaagcttgctttctgaaacaaagaaacttgttagaacagagctt
gctaatatggaaaatgaaggaataaaggaaattggaaaaattaaacaaaaaataagggca
aaagttggagaattccttaataaggaaacagatagagagcctataattttaccaattata
atggaggtttag
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