Leptotrichia wadei: JCM16777_0232
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Entry
JCM16777_0232 CDS
T06741
Name
(GenBank) CRISPR/Cas system-associated protein Cas4
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lwd
Leptotrichia wadei
Brite
KEGG Orthology (KO) [BR:
lwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwd03400
]
JCM16777_0232
Enzymes [BR:
lwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM16777_0232
DNA repair and recombination proteins [BR:
lwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JCM16777_0232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
MutS_I
Motif
Other DBs
NCBI-ProteinID:
BBM41996
UniProt:
A0A7U6QXT3
LinkDB
All DBs
Position
228050..230923
Genome browser
AA seq
957 aa
AA seq
DB search
MEINYKNIGSDLKEILFEEFRKNEDVLFVFENSASFFEIKREFLRDEEIQQELGIFQNFK
MMNSYDFYENLFVTDKIVVKEEKQVVLFYNSLDEKLKKRLEVSSYYDIIDIAYNYYNLFA
ELQEHKINLEKVELEKWQEELFETLKMVDKKVMETCQLKGLILPYMLRNVKNISDNFLKR
YKKIYFVNKVRFSPFEKELVEKFEEKGIIVENILQLLENDFDEKELKISEGFSLPAKEVF
NEKNINIEIHEFGSKFGELLGLVRKLEKVEKENKKSSSKNELLKQNYRIFEAQENAEEMK
SDYQLLRQKKISSNLEITMKDTKIYRILNLIYNLLDNVKEIDRKNKEKLLLFRMKDFYDA
YKSNDLLEIFDLKESYYIFQDLVSKDYKYISKEELERINQEVLEKLEKENQKQKFKETYK
QRMMAVGKIIKFVEELEEICGYTTLKEYSDYLEKIYLDNEEKVKQDKNVKDKYFEALSEM
VVLEDFSFDNLWDKFFDENVSSNLLKLFLKYLDKKSIGLNLEDSIEDESEDAFSINSFAN
ISENTKENIIILNLQDSFPKVKIHNFLFSKVQRAKMGLPTSDDKKLIEIFKIYQNILAAK
NVYLAYVKDLESNVDSASVIEELKLKYGIGVIKGEISEAEELFFAKKYFLKDRTEKWVQK
EIGEFIPSKLEKNFEKIRNEKLSLGYYSFEKMRDFEYGYYLEKAIGEQEVEEIEDEINVK
IFGTIIHAFYENVVMENKVALENKIFKIDRNQLSEILKRVLNSFDYKVPKEYLEFYRKVS
FEEILNSAEKYFREFTEKLKEEEDIEIHFEERIKLSSEKELFENVFVNGVTDLHIKTSDK
DYLFDYKSGKLKDSKKGYKNYKVDKALEQLDYYSLMLENDGEKKIEKIVVDTWEGKLVSD
ERNEDKILTKKTVEEIITRYQTEKYYDLGNFKDQKNYFYKEYKSICRGEDEVGDEEE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaactacaaaaatattggatctgatttaaaagagatattatttgaagaattt
aggaaaaatgaagatgtgctttttgtgtttgaaaattcggcttcgttttttgagattaaa
agggagtttttacgagatgaggagatacagcaggaattagggatttttcagaatttcaag
atgatgaatagctatgatttttatgaaaatctgtttgttactgataaaattgttgtgaaa
gaggaaaaacaagttgtcctgttttacaattcgttggatgaaaagttgaaaaagagattg
gaagtgtcgagttattatgatattatcgacattgcttataattattacaatttgtttgcg
gaattacaggagcataagattaatttggaaaaggttgaattggaaaaatggcaggaagaa
ttgtttgagacgctgaaaatggtggataaaaaggtgatggaaacttgtcagctgaagggg
ctgattttgccatatatgcttagaaatgtgaaaaatatttcggataattttttgaaaaga
tataaaaagatttattttgtgaataaagtcagattttctccatttgaaaaggaacttgtg
gaaaaatttgaggaaaaagggataattgtggaaaatattttgcaattgttggaaaatgat
tttgatgaaaaagaattgaaaatatctgaaggtttttcattaccagcgaaggaagttttt
aatgagaagaatataaatattgaaattcatgaatttggcagtaaatttggagaattgctg
ggactggttagaaaattagagaaagttgagaaagagaataaaaaatcaagcagcaaaaat
gagcttctgaaacaaaattatcggatttttgaagcacaagaaaatgcagaagagatgaaa
agtgattatcagcttttgagacagaaaaagatttcttcaaatttggaaataacaatgaag
gatacaaaaatctatcgaatcttgaatttgatttacaatttgttggataatgtgaaagaa
attgacaggaaaaataaggaaaaattacttttatttcgaatgaaagatttttatgatgct
tataaatcaaatgatttattggagatttttgacttgaaggaaagttattatatttttcaa
gatttggtttcaaaggattacaagtacatttcaaaagaggaattggagcgaataaatcaa
gaagttttggaaaaattagaaaaagagaatcaaaagcaaaaatttaaggaaacttacaag
caaagaatgatggctgttggtaaaattattaaatttgttgaagagttagaagagatttgt
gggtatacgacattgaaggaatacagtgattatttggaaaaaatttatttggataatgag
gagaaagtgaaacaggacaagaatgtaaaagacaagtattttgaggctttgtcagaaatg
gttgtgctggaagattttagctttgacaatttgtgggataaattttttgatgaaaatgtt
tcatctaatttattgaaattgtttttgaaatatttggataaaaaatcaattggattgaac
ttggaagacagtattgaagatgaatctgaagatgctttttcaataaattcctttgcaaat
atttctgaaaatacgaaggaaaatataattattttaaatttacaagattcatttccaaag
gtgaaaattcataactttttgttttcaaaagttcagcgtgcgaaaatgggtcttcctaca
agtgatgataaaaaattgattgaaatatttaaaatttatcaaaatattcttgcagcgaaa
aatgtgtatttggcgtatgttaaggatttggaaagcaatgttgattcggcgagtgttatt
gaggaattgaagttgaagtatggaattggagttataaaaggtgagataagtgaagcagaa
gaacttttttttgcaaagaaatattttttgaaggacagaacagagaaatgggtgcaaaag
gaaattggtgagtttattccatcgaaattggagaaaaattttgaaaaaataagaaatgaa
aaattgagtttgggatattattcatttgagaaaatgagagattttgagtatggatattat
ttggaaaaggcaattggtgagcaggaagtcgaagaaatcgaagatgaaataaatgttaag
atttttggaactataattcatgcattttatgaaaatgttgtaatggaaaataaggttgct
ttggaaaataaaatttttaagattgatcggaatcagttatcagaaattttgaaaagagtt
ctaaattcatttgattacaaggttcctaaggaatatttagaattttatagaaaagtttcg
tttgaagaaattttaaattcggcagagaaatatttcagggaatttactgaaaaattgaaa
gaggaagaggatatcgaaattcattttgaggaaagaataaagctctcttcagaaaaagaa
ttgtttgaaaatgtgtttgttaatggagttacggatttacatataaaaactagtgataag
gattatttatttgattataaatccgggaaattgaaagacagtaaaaaaggttataaaaat
tataaggttgacaaggcattggaacagttggattattattcgttaatgctggaaaatgat
ggagagaaaaaaattgagaaaatagttgttgatacttgggaagggaaattggtgtcagat
gaaagaaatgaagataagatattgactaaaaaaactgttgaggaaattattacaagatat
caaactgaaaaatattatgatttagggaattttaaagatcaaaaaaattatttttacaaa
gagtataaaagtatttgcagaggggaggatgaagtaggtgatgaggaagaataa
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