Leptotrichia wadei: JCM16777_0917
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Entry
JCM16777_0917 CDS
T06741
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lwd
Leptotrichia wadei
Brite
KEGG Orthology (KO) [BR:
lwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lwd03032
]
JCM16777_0917
03400 DNA repair and recombination proteins [BR:
lwd03400
]
JCM16777_0917
Enzymes [BR:
lwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JCM16777_0917
DNA replication proteins [BR:
lwd03032
]
Prokaryotic type
DNA Topoisomerases
JCM16777_0917
DNA repair and recombination proteins [BR:
lwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JCM16777_0917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
BBM42668
UniProt:
A0A7U6LA83
LinkDB
All DBs
Position
961244..963622
Genome browser
AA seq
792 aa
AA seq
DB search
MARKLVIVESPSKAKTIEKILGRNYEVVASYGHVIDLPKTKIGIDVENNFEPQYKVIKGK
GEILKKLKEKAKKASNIYLASDQDREGEAIAWHISNYIKQPDKTRRIEFNEITKTAVNNA
IKSPRDINDNLVNAQQARRLLDRIVGYKISPLLWKIINRNASAGRVQSVALKLICDLEDE
INAFVPQKYWEVSTLIEKDINLNLVKIADEKVNKIFDEKVIKKLKKDLKNESLTLEKIEI
KKKSQKPPLVFKTSTLQQLASSYLGYGASKTMRIAQQLYEGLEIDGGNKGLITYMRTDST
RISIDAINMAKDYIIQNYGEKYVGKYVVKNSKSNVQDAHEGIRPSDINLVPDNIKGYLTN
EQYKLYKLIWDRFLVSQFAAMQYEQMQINATNKDYHFRGTINKVIFDGYYKIFKDEDEIK
TGDFPELKEGSVHPIEKLNVEEGITKPPTRFSEATLVKKLESEGIGRPSTYASIVETLKT
REYVEIIEKRFFPTYLGYEVKDELVKNFKDIMNVKFTANMEKELDKVEEGTVEWVQLLRD
FYSSLEKDIVKFEKEIDEIKKRRVVADVMDSEGNPMILKTGLYGKYLISEANEKEKISLK
GIPVSPEEIKKGEIFVKEAVEKLQNNKKGIPTDYTDENGVKYVLKVGRYGEYLESENYET
DEKRMSLPLELKQKYRKGSVIELDGVLQINEEMKRLYEIDKKLIEEAGVCEFCGRPYEIK
VGRYGKFLACTGYPECKTIKNIKTGKVTKVTEKEEKAKTKKTAKKSTSKVKSSTAKKKKT
ATAKKKKTTKKS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
ttggctagaaagttagttattgttgagtcaccatcaaaggcaaagaccattgaaaaaata
cttggaagaaattatgaggttgttgcatcttacgggcatgtgattgatttgccaaaaact
aaaatcggaatagatgtggaaaataattttgagccgcagtataaggttataaaggggaaa
ggtgagattttaaaaaaattaaaggaaaaggcaaaaaaggcaagtaatatttacctggct
tcggatcaggacagggaaggggaagctattgcctggcacatttcaaattatattaagcag
cctgataaaactaggagaattgaatttaacgagataactaagacagctgtaaataatgca
attaaaagtccgagggatattaatgataatcttgtgaatgcacagcaggctagaagattg
ctagataggatagttggttataaaataagtccacttttatggaagataattaatcgtaat
gcaagtgctggacgggttcagtcggttgcgttaaagttgatttgcgacctggaagatgaa
ataaatgcgtttgttccgcaaaaatattgggaagtcagtacattaattgaaaaagatatt
aaccttaatttagtaaaaattgcagatgagaaagtgaataaaatatttgatgaaaaagtt
ataaaaaaactaaaaaaagacttgaaaaatgaatcgttgacacttgaaaaaatagaaatt
aagaaaaaatctcaaaaaccgccacttgtatttaaaacgagtacgttacagcagcttgct
tcatcatatcttggatatggcgcaagtaaaactatgagaattgcgcagcagctttatgaa
gggcttgagattgatgggggaaataaagggcttataacttatatgagaacagattcaaca
agaatttccattgatgcgataaatatggcaaaggattacataattcaaaattacggggag
aaatatgtggggaaatatgtcgtaaaaaattcaaagtcaaatgttcaagatgcacatgaa
ggaattcgtccatctgacattaacttggttcctgataatataaagggatatttgacaaat
gagcagtataagttgtataaattaatttgggataggtttttagtttcacagtttgcagcg
atgcagtatgagcaaatgcaaattaatgctacgaataaagattatcattttaggggaacg
attaataaggttatttttgatggatattacaaaatttttaaagatgaagatgaaattaaa
actggagattttccagaattaaaagaaggaagtgttcatccaattgaaaaattaaatgtt
gaagaaggaattacaaagccgccaacaagattctcagaagcaactcttgtaaaaaagtta
gaatctgaaggaattggacgtccatcaacttatgcttcgattgtcgaaactttgaaaaca
agggaatatgtggaaattattgaaaaacgtttttttccaacatatttgggatatgaagta
aaagatgaacttgtgaaaaattttaaagacattatgaatgtgaaatttacagcgaatatg
gaaaaagaactggataaagttgaagaagggactgttgagtgggttcagcttttgagagat
ttttatagttcattggaaaaggatattgttaagtttgaaaaagaaattgatgaaataaaa
aaacgaagagttgtggcagatgtaatggattctgaagggaatccaatgattttaaaaact
gggttgtatggaaaatatttgattagtgaagcaaatgagaaggaaaaaatttcattaaag
ggaattcctgtgtcgcctgaagaaatcaaaaagggagaaatttttgtaaaggaagcagtt
gaaaaacttcaaaataacaaaaagggaattccgactgattatactgatgaaaatggagtt
aaatatgtattgaaagttggaagatatggagaatatcttgaaagcgaaaattatgaaaca
gatgaaaaacgaatgtcgttgccgctggaattgaagcaaaaatatagaaaaggttctgta
atagaactagatggtgttttgcaaataaatgaggaaatgaaacggctttacgaaattgat
aaaaaattaatagaagaagctggagtttgtgaattttgtggaagaccttatgaaataaaa
gttggaagatatgggaaattccttgcttgtactggttatccagaatgtaagacaataaaa
aatataaaaactggaaaagtgacgaaagtaactgaaaaggaagaaaaagcaaaaactaaa
aaaactgctaaaaaatcaacttccaaagtaaaatcgtctactgcaaaaaagaaaaaaaca
gcaacagctaaaaagaagaaaacaactaaaaaatcgtaa
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