Leptotrichia wadei: JCM16777_1541
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Entry
JCM16777_1541 CDS
T06741
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lwd
Leptotrichia wadei
Pathway
lwd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lwd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JCM16777_1541 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lwd03021
]
JCM16777_1541 (rpoA)
03400 DNA repair and recombination proteins [BR:
lwd03400
]
JCM16777_1541 (rpoA)
Enzymes [BR:
lwd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JCM16777_1541 (rpoA)
Transcription machinery [BR:
lwd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JCM16777_1541 (rpoA)
DNA repair and recombination proteins [BR:
lwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JCM16777_1541 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBM43289
UniProt:
A0A7U6LBB8
LinkDB
All DBs
Position
complement(1606147..1607121)
Genome browser
AA seq
324 aa
AA seq
DB search
MLNIEKIAKNVRLTEEKEDNYTAKYTLEPLYRGYGNTIGNSLRRILLSSIPGTAIKGIKI
EGVLNEFSTIEGVKEAVTDIILNIKEIVVEADEPGEKKMTLSVKGPAVITAADIHVEPGL
KVINPEQVIMTVTTDRQVDIEFLVDSGEGFVISDEINTDGWPIGYLAVDAIYTPIKRVNY
SVEDTMVGRVTNYDKLILEIATDGSIEIKDALSYAVELLTWHLEPFTNIGNSMSKYRDSE
EELTETEEENENNIEDMKIEELDFTVRSYNCLKKAGVNTISDLTSMTYNELLKIKNLGKK
SLNEIIDKMKELGYDLGDNVGSEE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatattgaaaaaatagctaaaaatgtaagattgactgaagaaaaagaagataat
tatacagcaaaatatacattagagcctttatatagagggtatgggaatactattggaaat
tcacttagaagaatattattatcatcaattccaggaactgcaataaagggaatcaaaatt
gaaggtgtattaaatgaattttctacaattgaaggtgtaaaagaagcagttacagatatt
attttgaatattaaagaaatagtagttgaagctgatgaacctggtgaaaagaaaatgaca
ctttcagtaaaaggaccagctgtaattacagcagcagatattcacgtagaaccaggacta
aaagttataaatccagaacaagtcattatgacagttacgactgacagacaagttgatatt
gaatttcttgtggattcaggggaaggatttgtaatttctgatgaaattaatactgatgga
tggccaataggatatttagcagttgatgcgatttatacgcctatcaaaagagtaaattat
agtgttgaagatactatggttggacgtgttacaaattatgacaagttaattttggaaatt
gcaacagatggaagtatcgaaattaaagatgccttgtcttatgcggtagaattactaact
tggcatttggaaccatttacaaatattgggaacagtatgagtaaatacagagatagtgaa
gaagaattgacagaaactgaagaagaaaacgaaaataacattgaagatatgaaaattgaa
gaacttgactttacagtacgttcatataactgcttgaagaaggcaggagtaaatacaatt
tcagacttaacttcaatgacttataatgaattattgaaaattaagaatttagggaaaaaa
tcactaaatgaaattatcgataaaatgaaagaacttggttacgatttaggcgataatgta
ggcagtgaagagtaa
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