Leptotrichia wadei: JCM16777_1701
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Entry
JCM16777_1701 CDS
T06741
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lwd
Leptotrichia wadei
Pathway
lwd03030
DNA replication
lwd03430
Mismatch repair
lwd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM16777_1701 (dnaE)
03430 Mismatch repair
JCM16777_1701 (dnaE)
03440 Homologous recombination
JCM16777_1701 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lwd03032
]
JCM16777_1701 (dnaE)
03400 DNA repair and recombination proteins [BR:
lwd03400
]
JCM16777_1701 (dnaE)
Enzymes [BR:
lwd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM16777_1701 (dnaE)
DNA replication proteins [BR:
lwd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM16777_1701 (dnaE)
DNA repair and recombination proteins [BR:
lwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM16777_1701 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBM43444
UniProt:
A0A7U6LBL7
LinkDB
All DBs
Position
1807856..1811413
Genome browser
AA seq
1185 aa
AA seq
DB search
MGNKFVHLKLHTEYSLLEGVGKIDEYVGRAKEIGAKALAITDTSMFGVIEFFKKCKNAGI
KPIIGLEVFLDGLEKVGEFSLTLLAKNQNGYKNLSKLSSISYSRFTRNRNKIKYDELKKY
SDDLYILSGGINSEVVKGILDLENTQVRRVIEKLGKDFGDNFFIEVPAVERLEKARKMLF
DIVRKNKFDNFVITNDVYYPNREDAVLQKIVESIKEGSKIDTEKSGNSEILYDDLYLKSE
NEIEKSFENKEYSEFYGTGINNVEKIVENCNVDFEFHNFKFPKYSLPQNISEKEFLRNLV
FEGLFHKYLKKSVSDSEKLQLDKNFEIIEKEIAKDEIAGQKLKEVKIWEELLKNNLENVL
ERAEYELEIIDKMGYNGYFIIVWDFIKFSRENGVYVGPGRGSAAGSIVSYALNITEIDPL
EYNLIFERFLNPERISMPDIDIDFDQEQREIVINYVVNKYGAEYVAHIITFGTLKARLAI
RDVGRVLNVSLVKVDKIAKMIPFNTELKDALNNIPEIRKMYETDREIKRVIDYSLKLEGK
VRHASVHAAGVVISKDVLSDEIPTYSDGKTKIVSTQYQMKELEELGILKMDFLGLKNLTI
LRKTVENIEKRRKTKIVLNDIPLNDEKTYELLTKADTMGVFQCESAGIRSLMKKMKIEKF
EDIIALLALYRPGPLRSGMVDDFINVKNNRTEIKYIDDSLKYILEETYGIILYQEQVMKI
VSEMANYSLGEADELRRAIGKKNPELMKKNREKFVTNAENKGVLSKKANEIYDLVEKFGG
YGFNKSHSAAYALIVYWTAYFKANYPLEFFAAIMTTEVHNLDRFVVFVNEAKEKGINIFL
PDVNLSDYDFEIEENQADKENFGKVGIRFGLFAIKGVGAALINEIKKERKNGKFVSYKDF
GYRMKQNGITKKQLESLILSGALDGLDGNRFEKYKSIDKVLEYSQKKYESEEDLQMILFG
GKKEISVDFQMEKSDEFPQKVLLQNEKEYLGIYVSSHPLNEKKNLINIIFHNKISEISQK
ELKKVRIIGIVKNVKKFATRTGKEPMVKFEMEDFQKSIEVVCFPREYVTFGYKITEGQIM
VLEGIVNSEQNKNTVILNNICNIENLEENKNLKLYILIDEEVKEKNQELKQIILKNKGDN
QVFLAFKTNEKKEVVKLSEKYNVNLSLKFIRKVAKLVGVERIKLK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaatttgtacatttgaaattgcatacggagtattcgctgcttgaaggtgtt
gggaagattgatgaatatgttggaagagctaaggaaattggggcaaaagcacttgcaatt
acggatacttcgatgtttggggtgattgagttttttaagaagtgtaaaaatgctggaata
aagccgattattggacttgaggtgtttctggatggacttgagaaagtgggagaattttcg
cttaccttacttgctaaaaatcagaatgggtataaaaatttatcaaaattgtcgtcaatt
tcatatagcaggtttacacggaatcggaataaaattaagtatgatgaattgaaaaaatat
tcagatgatttgtatattttgtcgggcgggataaacagtgaagttgtaaagggtattctg
gacttggaaaatactcaagttagaagggttattgagaaacttggcaaggattttggggat
aatttttttattgaagttcctgctgtggaaaggctggaaaaggctagaaaaatgcttttt
gacattgtgcgtaaaaataaatttgacaattttgttattacgaatgatgtttattatccg
aatagagaagatgcagttttgcaaaaaattgtggaatcaataaaagagggaagcaaaatt
gatacagaaaaatcgggaaatagtgaaattttgtatgatgatttatatctaaaatctgaa
aatgaaatagaaaaaagttttgaaaataaggaatatagcgaattttatggaactggaatc
aataatgtggaaaaaattgtggaaaactgcaatgttgattttgagtttcataattttaaa
tttccaaaatattcgttgccgcaaaatataagtgaaaaggagtttttacgaaatctagta
tttgagggactttttcacaaatatctgaaaaaatctgtttcagattctgaaaaattgcag
ctggataaaaattttgagataattgaaaaagagattgcaaaagatgaaattgctgggcag
aaattgaaggaagttaaaatttgggaagaattattaaagaataatttggaaaatgttttg
gagcgtgcagagtatgaactggaaattattgataaaatggggtacaacggatattttatc
attgtctgggattttataaaattctcacgtgaaaatggggtttatgttgggcctggaagg
ggttctgcggctgggagcattgtttcatatgctttgaatattacggaaattgatccgctt
gagtataatctgatttttgaacgttttttgaatcctgaacgtatttcgatgcctgatatt
gacatagattttgatcaggaacagcgggaaattgtcataaattatgtggtaaataaatat
ggggcagaatatgtggcacatatcattacgtttggaacgctaaaggcaaggcttgcgatt
cgtgatgtggggcgtgtgttaaatgtttcgcttgtaaaagtcgataaaatcgctaaaatg
ataccgtttaatacggaactgaaagatgccttgaacaatattcctgaaattagaaaaatg
tatgaaactgacagggaaataaaaagagtgattgattattcactaaaattggagggaaaa
gtgcgacacgcctctgttcatgcggctggagtcgttatttccaaagatgtgctaagtgat
gagattccgacttattctgatgggaagacgaagattgtttcgacacagtatcaaatgaag
gaactggaagagctgggaattttaaaaatggattttcttggcttgaaaaatctcacgatt
ttgcggaaaactgtggaaaatattgagaaaagacgaaaaacaaaaattgtattaaatgat
attcctctaaatgatgaaaaaacgtatgaattgcttacaaaggctgatacaatgggagtt
tttcaatgtgagtcagctggaatcagaagccttatgaagaaaatgaaaattgaaaaattt
gaggacataattgcattgcttgcactctatcgtccaggacctttgcgaagtggaatggtg
gatgattttataaatgtgaaaaataacaggactgagataaaatatattgatgattcgcta
aaatacatacttgaggaaacttacgggataattttgtatcaggagcaggttatgaaaatt
gtgagtgaaatggcaaattattcgcttggggaagctgatgaactgcggcgtgcaattgga
aagaaaaatcctgaactaatgaagaaaaatcgtgaaaaatttgtaacaaatgctgaaaat
aaaggagttttatcgaaaaaagcaaacgaaatttatgatttagtggaaaaatttggtgga
tatggatttaacaagtcacattcggcagcttacgccctgattgtttactggacagcatat
tttaaagcaaattatccattagaattttttgctgcgataatgacaaccgaagtgcataat
ctggacagatttgttgtttttgtgaatgaagcgaaggaaaaagggattaatatatttttg
ccagatgtgaatttgtctgattatgattttgaaattgaggaaaatcaggcggataaagaa
aattttggaaaggttggaataagatttggactttttgcgataaaaggtgtgggagcagca
ttaattaatgaaataaaaaaagaacgaaaaaacggaaagtttgtttcctacaaagatttt
ggatatcggatgaagcaaaacggaattacaaaaaaacagctggaatcgctaattttgtcg
ggagcattggatggacttgatggaaacaggtttgaaaaatacaagtccattgacaaagtt
ctagaatacagccagaaaaaatacgaatctgaagaagatttgcaaatgattttattcgga
gggaaaaaggaaatatcagttgacttccagatggaaaaaagcgatgaatttcctcaaaaa
gtattgcttcaaaatgaaaaggaatatttgggaatctacgtttcgagccatcctttaaat
gagaaaaaaaatctgataaatataattttccataacaaaatatcagaaatttctcaaaaa
gagctaaaaaaagtacgaattatcggaatagtgaaaaatgtaaaaaaatttgcaacacgg
actggaaaagagccaatggtaaaatttgaaatggaagattttcaaaaaagtattgaagtt
gtctgttttccaagagaatatgtaacttttggctataaaatcacagaagggcagattatg
gtgctggaaggaattgtaaattccgagcaaaataaaaatacagttattttaaacaacatt
tgcaacattgaaaatctagaagaaaataaaaatctaaaattatacattttaattgacgaa
gaagtgaaagaaaaaaatcaggaattgaagcagattattttaaaaaataaaggtgacaat
caagtatttttggcgtttaaaacgaatgagaaaaaggaagttgtaaaactgtctgaaaaa
tataatgtgaacttatcgctcaagtttattaggaaagttgcgaaattggtgggggttgag
agaataaagttgaaatga
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