Listeria welshimeri: lwe0133
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Entry
lwe0133 CDS
T00422
Name
(GenBank) helicase c2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lwe
Listeria welshimeri
Pathway
lwe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
lwe0133
09124 Replication and repair
03420 Nucleotide excision repair
lwe0133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lwe03021
]
lwe0133
03036 Chromosome and associated proteins [BR:
lwe03036
]
lwe0133
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe0133
Enzymes [BR:
lwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
lwe0133
Transcription machinery [BR:
lwe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
lwe0133
Chromosome and associated proteins [BR:
lwe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
lwe0133
DNA repair and recombination proteins [BR:
lwe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
lwe0133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
HBB
DEAD_2
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
CAK19551
UniProt:
A0AEW9
LinkDB
All DBs
Position
131849..134188
Genome browser
AA seq
779 aa
AA seq
DB search
MRNMRISVRRLVEFVLRSGSIDNRMASSNRALEGTKIHQLLQKSAGDEYQAEVSLKLERV
VDNIAFLLEGRADGIIKGEIIDEIKTTETPMEEITEDFRPLHWAQLICYGFILAETAKLD
KVTLQLTYYQVVDEEIKQFQRVMTRSEMALFVDDLLSKYAVWAKMSAAWEMKRNKTIQEL
SFPYKSYRRGQRELAIAVYRTAMSGESLFCEAPTGIGKTMSTLFPAMKAMGTGKIDKIFY
FTAKTITRQVAEDALIEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQSEEAITRPVVETYARKHTLCPFELSLDVALFCDAIICDYNYLFDPVIYLKRF
FAEGPGKYTFLVDEVHNLVDRARSMFSATLRKSLIMQVKRGLDKKLNKRLLNAINAMNRE
MISLNKKLTELGKTVYVNKEKLVDWNEAILKFTFVAKEWLPQNNQSESQADVLELYFESL
RYVAIAECYDERYVTQVTRSHGDLEIKQLCLDPAFLLSEKLKLGDSSVLFSATLRPIDYY
TNVLGGEKDTSRMIFSSPFKQNNMHLLVADFISTKYQMRENSLESVVDALFALISGKKGN
YLFFFPSFLYLQNVYELFREKYPEVQVQKQETSMDEERREHFLEMFQADNEETLVGFCVL
GGVFSEGVDLRGDRLVGAAIVGVGLAQLNYESDLIKDYYNKSIGRGFDYAYQIPGMNKVL
QAVGRVIRGEADRGVVLLIEERFSAERYRALFPAHWNHAKTVKNIHEISHEVSEFWQNS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatgcggatttcggttcgacgtttagtggaatttgtccttagaagtggaagt
atagataatcgcatggctagttcaaatcgtgctttagaaggaacgaaaatccatcaacta
ctccaaaaatcagctggagatgaatatcaagccgaagtaagtttaaaattagagcgagta
gtagataatatagcttttttactggaaggtcgagcagatggaattatcaagggagaaatt
atagatgaaattaaaacgactgaaacaccaatggaagaaattacggaagatttccgaccg
ctccactgggcgcaacttatttgttatggatttattctagctgaaactgccaaacttgat
aaggtcactcttcaattgacctattaccaagtggtggatgaagagataaaacaatttcaa
cgtgtgatgactcgctccgaaatggcgctttttgtggatgatttactttccaaatatgcc
gtttgggcgaaaatgtcggcggcttgggaaatgaagcgaaataaaaccattcaagaacta
tcttttccatataaaagttacagacgtggacaaagagaactggcaattgcggtttaccgg
acggctatgtcgggggaaagtttgttttgcgaggcgccaactgggattggtaaaaccatg
tcgaccttatttccagcaatgaaagcaatgggcactggaaagattgacaagattttttat
tttacagccaaaacaattacgaggcaggttgcggaagatgcacttatagagatgcgacga
aaagggttagctgcaagaagtgtaacaatcacagctaaagataaaatttgttttttagat
gagcggaaatgtgagccagaccattgtcagtttgcgcgtggttattatgatcgtttgaat
gaagcattgtttgatatgttgcaatctgaggaagcaataactcgtccagttgtagaaaca
tatgcccgaaaacatacgctttgtccttttgaattatcgctcgatgtggcacttttttgt
gatgcgattatttgtgattataattatttatttgatccagtaatctatctgaaacgtttt
tttgcggaaggtccggggaaatacacatttttagtagatgaagtgcataatttagtggat
cgtgcgcgctctatgttttctgctaccttgcggaaatcactgataatgcaggtgaaacgt
ggactggacaaaaaattaaataaacgtttattaaatgcaataaatgcgatgaacagagaa
atgatttcactcaacaaaaaactaacagaattaggaaaaaccgtttatgtgaataaagaa
aagttggttgattggaatgaggcgatattaaagttcacatttgtggcaaaagaatggcta
cctcaaaataatcagtcagaatcacaagctgatgtgctagaactttattttgaaagctta
cgatatgtagcaattgcagaatgttatgatgaacgctatgttacacaagtgacacgaagc
catggagatttagaaataaaacagttatgtctcgatccagcattccttctatcagaaaaa
ttgaaactaggagacagctcggttcttttttcggctacccttagaccgatagattattat
acgaatgtacttggcggtgagaaagatacaagccgtatgattttttcttccccttttaag
caaaataatatgcatttacttgtggcagattttataagcacgaaataccaaatgcgagaa
aatagcttagaatcagttgtagatgcactatttgcattgatttctggaaaaaaaggtaat
tatttatttttcttcccatcatttttgtatttacagaatgtatatgaattatttagagaa
aagtatccagaagttcaggtgcaaaaacaagaaacatcaatggatgaagagcggcgagag
cattttttagagatgttccaagcagataatgaagaaacattggtcggcttttgtgtttta
ggaggcgttttttctgaaggcgttgatctaagaggtgatcgcctagttggagcggctatt
gtaggggtaggactcgcacagcttaactatgaatcagatttaattaaagattattataac
aaatctattggtcgtggatttgattatgcttaccaaataccgggaatgaataaagtactc
caagctgtcgggcgtgttattcgaggggaagcagatcgcggagttgtattattaatagaa
gaacgtttttccgctgaacgatatagagctttgtttccggctcactggaatcatgcaaaa
acagtgaaaaatatccatgaaatctcccatgaagtaagtgaattttggcagaatagctga
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integrated database retrieval system
