KEGG   Listeria welshimeri: lwe0228
Entry
lwe0228           CDS       T00422                                 
Symbol
rpoC
Name
(GenBank) RNA polymerase beta subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
lwe  Listeria welshimeri
Pathway
lwe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lwe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    lwe0228 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lwe03021]
    lwe0228 (rpoC)
   03400 DNA repair and recombination proteins [BR:lwe03400]
    lwe0228 (rpoC)
Enzymes [BR:lwe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     lwe0228 (rpoC)
Transcription machinery [BR:lwe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     lwe0228 (rpoC)
DNA repair and recombination proteins [BR:lwe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      lwe0228 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C
Other DBs
NCBI-ProteinID: CAK19646
UniProt: A0AF64
LinkDB
Position
240604..244209
AA seq 1201 aa
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
SCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVMDM
SPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYREKYGKGFSAGMGAEAIKKILS
DIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRNSGNNPSWMVLDVLPVIPPEIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGRGLAHNIKSAKRKIERMSPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERENAVGEGTIFKDINEAQLAYQNGYVHLHSRIAVF
AGSIPNERFTDEQRNQLLITTVGKLIFNTILPKSFPYINEPTKFNLEIETPSKYFVDTTT
DVRAHIAAQELIDPFKKKILGNIIAEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGI
ADILTLEEKHEILEKAHDTVEKITKSFRRGLITDDERYERVIAVWNAAKDEIQGKLILSL
DRLNPIFMMQDSGARGNISNFTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFIST
HGARKGLTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLE
ERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVEAGIEEVTIRSAFTCNTKHGVCK
KCYGKNLATGTEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIITEVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVER
GEALTEGSVDPKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
MDTGDTNILPGTLMDIHTFTEANREAILSGSQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITN
I
NT seq 3606 nt   +upstreamnt  +downstreamnt
ttgttagatgttaataattttgagtatatgaaaatcggtctggcatctccagataaaatt
cgttcatggtctcatggtgaagtaaaaaaacctgaaaccatcaactacagaacgctgaaa
ccagaacgtgacggcttattctgtgaaagaatttttggaccaatgaaagactgggaatgt
tcttgtggtaaatacaaacgtgtgcgctataaaggcgtagtttgtgaccgttgtggagta
gaagtaacgaaatcaaaagtgcgccgtgaacgtatgggccatattgaactcgcagctcct
gtatcccacatctggtacttcaaaggaattccaagccgtatgggtcttgttatggatatg
tcaccacgtgcattagaagaaattatctactttgcatcatatgtggttacagaaccaggc
gatactccacttgaaaagaaacaacttttatctgaacgtgaataccgcgtttatcgcgaa
aaatatggtaaaggtttctccgctggtatgggagcagaagcaattaaaaaaattctatcc
gatatcgacttagaaaaagaaacaaatgatttaaaagaagaactaaaatctgcacaaggt
caacgtcgtactcgtgcaattcgtcgtttagaagttatggaagctttccgtaactcagga
aacaatccaagctggatggtgcttgacgtattaccagttatcccaccagaaattcgtcca
atggtacaacttgaaggtggccgttttgcaacaagtgatttgaatgacttatatcgtcgg
gtaatcaaccggaacaaccgtttgaaacgcctacttgatttaggtgcgccaaacattatc
gtgcaaaatgaaaaacggatgctacaagaagctgttgatgcattaattgacaacggtcgt
cgtggtcgtccagtaactggtccaggtaatcgtccgcttaaatccctttctcatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgtcgattattctggt
cgttccgttatcgtagttggacctaacctaaaaatgtaccaatgtggtcttccaaaagaa
atggcacttgaattattcaaaccatttgtaatgaaagaactagttggacgcggcttagcg
cacaacattaagagtgctaaacgtaaaatcgaacgtatgtcaccagaaatttgggacgta
ttagaagaagttatccgtgaacatccggtattacttaaccgggcacctactcttcacaga
cttggtattcaagcatttgagccaactctagttgaaggtcgcgcaattcgtcttcaccct
cttgtatgtacagcttacaacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatccgcagaagcacaagcagaagctcgtattctaatgcttgcagctcaaaacattttg
aaccctaaagatggtaaaccagttgtaacaccttcccaagatatggtgctaggtaactac
taccttactttagaacgtgaaaatgctgttggtgaaggtactatcttcaaagatatcaat
gaagcgcaacttgcatatcaaaacggttatgtacacttacattcacgtattgctgtattt
gctggttcgattccaaatgaacgtttcactgatgaacaacgcaatcaattattaattacg
actgttggtaaacttattttcaatacaattttacctaaatcgttcccttatattaatgaa
ccaacgaaattcaacttagaaatcgaaacaccatcgaaatatttcgttgatacaacaaca
gatgttcgtgctcatattgcggcacaagaactaattgatccattcaagaagaaaatcctt
ggtaacattatcgcggaagtcttcaagaaattccatattactgaaacttctaaaatgctt
gaccgtatgaaagatcttggcttcaagatttcgactaaggccggcatgacagtaggtatt
gcggatatcttaacacttgaagaaaaacatgaaattcttgaaaaagcacatgatactgtt
gaaaaaatcactaaatcattccgtcgtggtttgattacagatgatgaaagatacgaacgc
gttatcgctgtatggaatgctgctaaagacgaaatccaaggcaaactgatcttgagttta
gatcgcttaaacccaatcttcatgatgcaagattccggagctcgtggtaatatttccaac
tttacacagcttgcaggtatgcgtggactgatggctgacccatccggacgtatcgtagaa
ttgccgattacatctaacttccgtgaaggtttaacggtcttagagtatttcatttctacc
catggtgcgcgtaaaggtcttactgatacagcccttaaaactgccgattctggttacctt
actcgtcgtcttgttgacgtggctcaagatgttatcattcgtgaagacgattgtggcact
gaccgcggtcttacaattaaagccattcgtgaaggtactgaaatcattgaaccacttgaa
gaacgtctagaaggtcgttattctcgtaaaactattcgtcacccagaaacaaaagaagtt
attgctcgtgaaaatgacttaattacagaagcaattgcaactcaaatcgttgaagctgga
attgaagaagtaactattcgttctgccttcacatgtaatactaaacatggtgtatgtaaa
aaatgttatggtaaaaacttggcaactggtacagaagtcgaagttggagaagcagttggt
atcatcgctgcccaatctatcggggaaccaggaactcagcttactatgcgtacattccat
acaggtggggttgccggagacgatatcacgcaaggtcttccacgtattcaagaaatcttt
gaagcacgtaatccgaaagggcaagctatcatcactgaagttggtggtgaagtagtttct
atcgaagaaggtcgtgatcgtcaacaagaaatcactatccaaggtacagatgaccgccgt
tcttacaacattccttacactgctcgcctgcgcgtagaagaaggaacaattgttgaacgt
ggggaagctctgacagaaggttctgttgatcctaaagccttgatccgtgttcgtgacgtt
ttatccgttcaagaatatctacttgctgaagtacaaaaagtttaccgtatgcaaggggta
gaaattggcgataaacacgttgaagttatggttcgtcaaatgttacgtaaaatccgcgta
atggatactggtgatacaaacatcttgccaggtacattaatggatattcatacgtttaca
gaagccaaccgtgaggctatcttaagtggtagccaaccagcaacaggtcgtccagttctt
ctagggattacaaaagcttcccttgaaactgattccttcttgtctgctgcatcattccaa
gaaacaactcgtgtcttgacagatgctgcaatcaaaggaaaacgtgacgaacttctagga
cttaaagaaaatgttatcctaggtaaacttgttccagctggtacaggtattggtcgttac
cgcaaactgaaatccgaagttattaaagaaacagctgaagtaactgacgaaatcacaaat
atttaa

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