Listeria welshimeri: lwe0555
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Entry
lwe0555 CDS
T00422
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lwe
Listeria welshimeri
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe0555 (phrB)
Enzymes [BR:
lwe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
lwe0555 (phrB)
DNA repair and recombination proteins [BR:
lwe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
lwe0555 (phrB)
Prokaryotic type
lwe0555 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
CAK19973
UniProt:
A0AG41
LinkDB
All DBs
Position
594096..595508
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AA seq
470 aa
AA seq
DB search
MTSVMWFRRDLRINDNKALYHASKENDLILLFQVNPEQFISGSPSHQAFFSSVANFKKEI
DKNAHLQIMFGEPIELLKRLKDAIPAWDKVFFNQDETGYGAKRDKAARAFFEYNNITVHA
YHDAYLHSAEEVKKTSTEYYKIFTPYYKKWREEIKETPFKSVLTPENIIKKELFPHDEEQ
FEKLIQDLPELDLKVLGEEAANTRLKNFIKRDLAEYAKARDIPDSDQTSHLSRYLRTGEI
SIRTVWQALQQTKPTEGRAIFEKELCWRDFYNMIYVSFPNQKNEPIQENYRFIEWENNRE
FFKQWQEGKTGYPLVDAAMRQLKETGWMHNRLRMITASFLTKDLLIDWRYGEKYFQQMLI
DYDPASNISGWQWAASTGTDAVPYFRIFNPTTQSEKFDPSGKFIRKYVEELSNLPDKFIH
QPEKMSESQQKEHNLILGDDYPLPIVDHKERRKLAISRYEFSKEQFRGNI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagtaatgtggtttcgcagagatcttcgaataaacgataataaagccctctat
catgctagtaaagagaatgatttaattttgttgtttcaagttaacccagaacaatttatt
tcaggaagtcctagtcatcaagcatttttttcgagcgtggctaattttaaaaaagaaata
gataaaaatgctcatttacaaattatgtttggcgaaccaattgaacttttgaaacgactg
aaagatgcgattccagcatgggataaagtgtttttcaatcaagatgaaacaggatacgga
gcaaaaagagataaagcagcacgcgcattttttgaatataacaatattactgttcatgct
tatcatgatgcctatcttcattcagccgaagaagtaaaaaaaacatccacagaatactat
aaaattttcactccttattataaaaaatggcgtgaggaaataaaagaaacgccatttaag
tctgttttaacgccagaaaatattataaaaaaagagttatttcctcatgacgaagaacag
tttgaaaaattaattcaagatttacctgaactagatttgaaagtgttaggagaagaggca
gcaaatactcggttaaaaaattttataaagagagatttagcagaatatgccaaagcgaga
gatatcccagactcggatcaaactagtcatttatcacgttatttacgcacgggtgaaatt
tcgattagaaccgtttggcaagcattgcaacaaacaaaacccacagaaggccgagcaata
tttgaaaaagagttatgttggcgcgacttttataacatgatttatgtttctttcccaaat
caaaaaaacgaaccaattcaagaaaattatcgttttattgagtgggaaaataatcgcgag
tttttcaaacaatggcaagaaggtaaaacgggttatcctctcgtagatgcggctatgcgt
cagttgaaagaaacgggctggatgcataacaggctaagaatgattacggcttcctttttg
actaaagatttactgattgattggcgttatggcgagaaatatttccaacaaatgttgatt
gattatgatccagcaagtaatatcagtggttggcaatgggctgcatcaaccggaacagac
gcagtaccttattttagaatttttaacccaacgacacaatcagaaaagtttgatccttct
gggaaatttattcgtaaatatgtggaagaactatcgaatttgcctgataaatttatccat
caacctgaaaaaatgtctgaaagccagcaaaaagagcataatttaattttaggagacgat
tatcctttgccaattgttgaccataaagagcgccgaaaattagcaatttcgcgttatgag
tttagcaaagagcagttcaggggaaatatataa
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