Listeria welshimeri: lwe0859
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Entry
lwe0859 CDS
T00422
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lwe
Listeria welshimeri
Pathway
lwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lwe0859 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwe03019
]
lwe0859 (deaD)
03009 Ribosome biogenesis [BR:
lwe03009
]
lwe0859 (deaD)
Enzymes [BR:
lwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lwe0859 (deaD)
Messenger RNA biogenesis [BR:
lwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lwe0859 (deaD)
Ribosome biogenesis [BR:
lwe03009
]
Prokaryotic type
rRNA helicases
lwe0859 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
NABP
Motif
Other DBs
NCBI-ProteinID:
CAK20277
UniProt:
A0AGZ5
LinkDB
All DBs
Position
893622..895178
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AA seq
518 aa
AA seq
DB search
MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPM
IHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKN
PQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLL
FSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP
ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTK
KRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANQLLEKYDATDIAAAMLK
MLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR
RSGGGSGGGSGAGGNRDRRSGGEQRSGGNKGNYSQKSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaatcggatg
gggtttgaagaagcaacaccaatccaagaaaagacaattccattaggattagaaggtaaa
gacttaatcggacaagcacaaacaggtactggtaaaacagccgcttttggtcttccaatg
attcacaaaattgaccaaaagagtaataacgtacaagctttaattattgctccaacgcgt
gaacttgcaattcaagtttccgaagagctttataaacttagctatgacaaacatgtacgt
gtgctagcggtttacggtggtagtgatatcagccgtcaaattcgttcacttaagaaaaac
ccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgcacactc
aaactagatcacgtggaaacacttgtactagatgaagcagacgaaatgctaaacatgggc
ttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaacattacta
ttttctgcaacgatgcctgacccgattcgccgtattggtgaacgtttcatgcacagccca
gaacttattcgtattaaagcgaaagaaatgactgcactattaatcgaacaattcttcgta
aaagtgcacgaaaaagaaaaatttgacgtattatctcgtttattagacgttcaagcacca
gaactagcaatcgtttttggtcgtacaaaacgtcgtgtagacgaactatctcgcgcgctt
gatatgcgtggttacgtggctgaaggtatccacggcgacttaacgcaagcaaaacgtatg
agtgtattacgtaaatttaaagaaggaaaaattgatgttctagttgcaacagatgtagca
gcacgtggacttgatatttccggcgtaacacatgtatataactatgatattccacaagat
ccagaaagctatgttcaccgtattggtcgtactggtcgtgctggtaaagaaggtatggcg
attacattcgttcaacctcgtgaaatgggttatttacgtattgtggaagaaactacgaaa
aaacgcatgcaaccacttcaagctcctacttgggacgaagcatttgcaggtcaattacgc
gtagcaactgaaaaaattcaagaagcaattacagaagaaaacttagctgactacaaaacg
tttgctaaccaacttctcgaaaaatacgatgcaacagacatcgcagcagcaatgcttaaa
atgttagctaaagaaccagataaaacacctgtccatattacagaagaacgtccattacca
tctcgtggtggcggtggctacaaaggtaaaaatggtaaaggcggcaaaggtggcggctat
cgcggtggaagcggcaaaggcggaagctaccgtgatcgtaacaacagcggaaaaggtcgt
cgtagtggcggcggttctggtggtggaagcggtgctggcggcaatcgtgatcgtcgcagt
ggtggcgaacaacgtagtggcggcaacaaaggcaactactcacaaaaatctaaataa
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