Listeria welshimeri: lwe1292
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Entry
lwe1292 CDS
T00422
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lwe
Listeria welshimeri
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lwe03032
]
lwe1292 (topA)
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe1292 (topA)
Enzymes [BR:
lwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
lwe1292 (topA)
DNA replication proteins [BR:
lwe03032
]
Prokaryotic type
DNA Topoisomerases
lwe1292 (topA)
DNA repair and recombination proteins [BR:
lwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lwe1292 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
JHBP
DUF2996
Toprim_2
Toprim_3
HypA
Motif
Other DBs
NCBI-ProteinID:
CAK20710
UniProt:
A0AI78
LinkDB
All DBs
Position
1280998..1283076
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVEGKKKKLSTADDVKEVMSAIKGKTFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEAGNFIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFVPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKQFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCNERALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacaattgaaaaatat
ttaggtaagaaatttaaagtcaaagcttcgatgggacatgttagagatttaccaaaaagc
caaatgggcgtagatacagaacatgactatgaaccacgttatattacgattcgcggaaaa
ggccctgttttaaaagaattaaaacaagcagctaaaaaagcgaaaaaagtctatctcgca
gccgatccagatcgcgaaggggaagcaattgcgtggcatctagctaacagtcttgagtta
gatcaatcagacaaattacgtgtagtatttaatgaaataaccaaagaagcagtcaaagaa
tcattcaaaactcctcgaaaaattgatatggatcttgtaaatgctcagcaagctcgcagg
attttggatcgcttggttgggtataacattagtcctatactttggaaaaaagtgaaaaaa
ggtctaagtgctggacgagttcaatcaatagcacttcgcatcattattgatagagaaaaa
gaaataaataattttaaacccgaagaatattggacaattgatggtaacttccttaaagga
aagaaaaaattccaagctaatttttatggagtggaaggtaaaaagaaaaaactatctact
gcggatgatgtgaaagaagtaatgtctgcaattaagggaaaaacatttgatgtaacagat
gtaactaaaaaagaacgacttagaaacccagctgctccatttacaacatctagtttgcaa
caagaagcagcacgtaaattaaattatcgtactagaaaaacaatgatgcttgctcaacaa
ttatacgaaggaatcacccttggaaaacagggtacagtaggtttaatcacttatatgcgt
actgactccacacgtattgcagattctgctattttagaagcaggtaattttattaaagaa
acttatggacctgaattttctcgtaaccataaacgttcagataaaaatgctaaaggtgca
caagatgcccatgaagcaatccgtccaaccagcgctatgagaagcccgcaagaagtaaaa
gaatatctaacgcgtgatcaacttcgcttatatcgtctaatttgggaacgatttattgct
agccaaatgacgccagctgtccttgatacgatgcgagtagaccttgataataatggcgtt
aactttagagcaaacggatcaaaaattaaattccatggatttatgaaagtttatgtggaa
agtaacgatgacaatacggaagaaaaagaaaatattttaccggatttgaaaaaaggagac
aaggtacagtccgaatcactagaacagcgtcagcattttacgcagccacctccacgttat
acagaagcaaggttagtaaaaacgcttgaagaaattggcatcggtcggccatctacttat
tcaccgacgctagatacgattcaacgaagaaattatgtttctttaacaaacaaacgattt
gttcctacagaacttggtgaaatagttaatgaaatgattgaagaatatttccctgaaatt
ttagatgtgaagttcactgcgaatatggaaagtgaattagatgaagtagagcacggtgaa
gtggaatgggtaaaagttattgatgaattttataaacaatttgaaccaaatgtcataaaa
gcagatgcagaaatggaaaaaattgaaattaaagacgaaccagctggtatcgattgcgat
ctttgtggagcgccaatggtatacaaaatgggaaaatatgggaaatttcttgcatgtagc
aggttcccagattgccgaaatacgaaagctatcgtcaaagaaatcggtgtgacttgtcca
aaatgtgagaaaggacatgttatagaaagaaaaagtaagaaaaaacgtattttctatggt
tgtgaccgttatccagattgcgattacgtttcttgggataaacctgttgaacgagcttgt
ccgaaatgtaatgaacgagcactagtagagaagaaattgaaaaaaggtgtacaagtacaa
tgtacaaattgtgattacaaagaatcaacccaacaataa
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