Listeria welshimeri: lwe1343
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Entry
lwe1343 CDS
T00422
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lwe
Listeria welshimeri
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lwe03016
]
lwe1343 (truB)
Enzymes [BR:
lwe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
lwe1343 (truB)
Transfer RNA biogenesis [BR:
lwe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lwe1343 (truB)
Prokaryotic type
lwe1343 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
Motif
Other DBs
NCBI-ProteinID:
CAK20761
UniProt:
A0AIC9
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All DBs
Position
1335611..1336525
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGEIIATKDLAEISPEALQSVLTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGLASLNESNPTFQLEISCGKGTYIRTL
AVMIGELLGYPAHMSKLERTRSGFFKKEDCFTLSEIDEMMQANDLNFLYPLEKGIESMTK
LIIDDEIHAKVLNGALLPKALFVSVENESRVALIFEGKLTAIYKPHPEKKDLWKPEKVIE
LNEA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattatccctttgtggaaagaacgcgggatgacgagtcatgattgcgttttt
aaattaagaaaaattctacatacaaaaaaagttggacataccgggacactcgatccagaa
gtggaaggtgtactcccaatttgtatcggacgagcgacaaaactggcggaatatgtaaca
gatgaaggaaaagtttatgtagctgaaataacattaggtaaatcaactacaacagaagat
gccactggcgaaatcatagcaacaaaagatttagcagaaatttcaccagaagcacttcaa
tccgtactcactaagcttacaggaaaaatcacccaaattccgccgatgttttcagctgta
aaagtgaacgggaagaaattgtatgaatatgcaagagcaggaatagaggtagaacgacca
tccagacaagtggatatttattcattaacccgtttagatggcctcgcttctctaaatgaa
tcaaatcctacttttcaattagaaatctcttgtggaaaagggacatatatccgtacactc
gcagtcatgattggtgaattgttaggatatccagcacatatgtccaaactagaacgtacc
cgaagtggcttttttaaaaaagaagattgtttcaccttgtctgaaattgacgaaatgatg
caagcgaatgatctcaattttttatatccacttgaaaaagggattgaatccatgacaaaa
ctaattattgatgatgaaatacatgcaaaagttttaaatggcgcattattaccaaaggca
ttatttgtatcggttgaaaatgaatctcgtgtcgcgcttatttttgaaggtaaattaact
gcaatttacaagccacatccggagaaaaaagacctttggaaaccagaaaaagtcattgaa
ttaaatgaagcatag
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