Listeria welshimeri: lwe1661
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Entry
lwe1661 CDS
T00422
Symbol
sbcC
Name
(GenBank) exonuclease SbcC, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lwe
Listeria welshimeri
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe1661 (sbcC)
DNA repair and recombination proteins [BR:
lwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lwe1661 (sbcC)
Archaeal homologous recombinant proteins
lwe1661 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
DUF3947
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CAK21079
UniProt:
A0AJ97
LinkDB
All DBs
Position
complement(1670788..1673859)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEAILQRLA
HTVYYEKVENLLWEKQKEAEILVVEARKKVAELAELSLPDVEITGKTTSEISVLQTEAIQ
KEQTVLAELESELSIIRKQTSEAVEKVTLAKEQLLDWQNLDLYIEEVAKLEAEQGVYRAI
EGRIEAAKRASNIRSQDALCIRLKEQLETAEHTEKQVATATEQVKAQFLHAKKQKETLAE
QEKELETNKRTLFQLEEMEPKIMEFETVIIQKRRAEMEWKEATDHLEKVMKTEQDVIAEI
KLAESQLTEINQAELAHLEAINKHTTVKALIEKNQELVNKRAKMAAWDLEKQTEEQTLAQ
LLTEKTTIETTIKQQETNLQKEQAASLATHLHEGDACPVCGSVSHPKLAEFGETANFEIL
EAAKGQLHEKELAINEAEKSINQLEWQLNEWADVTEVNLDETKQILAENKLLAENLAKKI
DQLQTKTAQKATVQSNVETLKNKQNETETVKNHIALQVENSHQQVQLATGKLSYLEESIP
VDLRDKVMFDKKKNELTTSIETHLKQAEQVDASFRQADKDITRLESTLQSAQKTTADAQE
ALQVQREIFKEAMKQNDFPTYESYKQALMSVDELKVQEEKVTNFERKRHLAISRQADLTE
KLKNKQKPNLEQLEFSMKEKQQQLTKAEESTMKQRELVTKQKEVVLNYQNSIQAVEKAEE
DYADIGLLADAARGKNARRLTFERYILAMFLDTIIQRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEIVQEMAGGISLETMFID
EGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFVT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaagttaacgatgcaagctttcggagcgtatgctaaaaaagaagtaatc
gactttgaaaaactaggaacggaacagatttttgttatctctggtaaaactggcgctggt
aaatccactatctttgatgccattagttttgcgatttttggtaaagcaaatacgtttgat
cgagaaagcttttcgatgcgtagtcattttgcgacggataaagaaataacggaagtaacg
cttgtttttagattaaaagacaagatttatcaaattagccgcattccgcaacaagaaatt
gccaagcagcgcgggaatggaacgacaacatctcctcaaaaagctgaattatatgaactg
attggcgatgaaatgaagttacttgcgagttcagttcgtgatgtcaatacgaaaatggaa
gaattaattcaacttaatgtggatcaattcagacaaattttaatgattccacaaggtgaa
tttagagaattactcgtatcagatagtaaagaaaaagaagcgattttacaacgtttagct
catacagtgtattatgaaaaagtggagaatttattatgggaaaagcaaaaagaagccgaa
attttagtagttgaagctcgaaaaaaagtggcagaactcgccgaacttagtttaccagat
gtggaaattactgggaaaacaacaagcgaaattagtgttttacaaacagaagccattcaa
aaagagcaaacggttttagcggaattagaaagtgaattaagcattattcggaaacaaaca
agtgaagccgtcgaaaaagtgacacttgctaaagaacagttgcttgattggcaaaattta
gatttatatatagaagaagtagctaaactagaagctgaacaaggagtttaccgagcaata
gaagggcgaatagaagccgccaaaagagcgagcaatatacggtctcaagatgcactatgt
attcgtttaaaagagcaattagaaacagcagaacatacagaaaaacaagttgctaccgcg
acagaacaagtgaaagcacaatttttacatgcaaaaaaacaaaaagaaacactcgctgaa
caagaaaaagaactagaaactaataaacgtactctttttcaattagaagaaatggaaccg
aagataatggaattcgagactgtaatcattcaaaaacggcgcgctgaaatggaatggaaa
gaagcgacggaccacttggaaaaagtaatgaaaacggagcaggatgtaatagcagaaata
aagttagcagaatctcaattaacagaaataaatcaagcggaacttgcgcacttagaagcc
attaataaacatacaaccgtcaaagcactcatcgaaaaaaatcaagaactagttaataaa
cgagcgaaaatggcagcatgggatttagagaaacaaacagaagaacaaacattagcccaa
ctcttaacagagaaaactaccatagaaacaacaattaaacaacaagaaacaaatctgcaa
aaagaacaagccgcgtcacttgcgacacatttacatgagggggatgcttgtcctgtctgc
ggttctgtatcacaccccaagcttgcggaatttggagaaacagccaattttgaaatactg
gaagcagctaaaggacaattacatgaaaaagaattagcaattaatgaggcggaaaaatcc
atcaatcaactagaatggcaactaaatgaatgggcagatgtcacagaagtgaacttagat
gaaacaaaacaaatcctagccgaaaataagttgctagctgaaaatttagcaaaaaaaatt
gaccaattacaaactaaaacagcccaaaaagcaactgttcaatcaaatgtggaaacatta
aagaataaacaaaatgaaacagaaacagtaaaaaaccatattgctcttcaagttgaaaat
tcgcatcaacaagtacaactagctactgggaaattaagctatttagaagagtccatccca
gtagatttaagagataaagtaatgtttgataagaaaaagaatgaactaactacaagtatt
gaaacgcaccttaaacaagctgagcaagtggatgcttcatttaggcaagcagataaagac
attactcgactagaatccactttacaatctgcccaaaaaacaaccgcagatgcgcaagaa
gcattacaagtacaacgtgaaatttttaaagaagcaatgaaacaaaatgattttccgacg
tatgaatcatataagcaggcattaatgtctgtagatgagctgaaagtacaagaagaaaaa
gtgacaaacttcgaacgaaaacgtcatttagccatttcacgtcaagctgatttaacagaa
aaacttaagaataaacaaaaaccaaatttggaacaactagagtttagtatgaaagaaaaa
caacaacaactcacaaaagcggaagaaagtacgatgaaacaacgggaattagttactaaa
caaaaagaggtagttttaaactatcaaaatagtatacaagctgtagagaaggcggaggaa
gactatgcagatattggtctattagcagatgcagcaagaggcaaaaatgcgcgtagatta
acttttgaacgctacattctcgcaatgtttttagatacgattatccaacgagcaaatcat
cgtttatcgaaaatgactagtgggcgctttgaattgcaacgaaaaatggaaaaagcaaaa
ggaaatgtccaaagtggcttggaattagaagtatttgacgaatatacaggattaacgcgg
catgtaaagactctttcgggcggggaaagttttaaaacttctttagcgcttgctttatca
cttgctgaaattgtccaagaaatggctggtgggatttcgcttgaaacaatgtttattgat
gaaggatttggtacgctggatcctgaatctcttgaagttgcggtagaatgtttgctggaa
acacaagaaaatggtcgacttgttggtattatttctcatgtacctgaacttaaagaaaga
atttcagcaaggcttgaagtgactgcgacgaaccatggaagtactactaaatttgttact
gctagtagctaa
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