Listeria welshimeri: lwe1661
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Entry
lwe1661 CDS
T00422
Symbol
sbcC
Name
(GenBank) exonuclease SbcC, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lwe
Listeria welshimeri
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe1661 (sbcC)
DNA repair and recombination proteins [BR:
lwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lwe1661 (sbcC)
Archaeal homologous recombinant proteins
lwe1661 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
DUF3947
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CAK21079
UniProt:
A0AJ97
LinkDB
All DBs
Position
complement(1670788..1673859)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEAILQRLA
HTVYYEKVENLLWEKQKEAEILVVEARKKVAELAELSLPDVEITGKTTSEISVLQTEAIQ
KEQTVLAELESELSIIRKQTSEAVEKVTLAKEQLLDWQNLDLYIEEVAKLEAEQGVYRAI
EGRIEAAKRASNIRSQDALCIRLKEQLETAEHTEKQVATATEQVKAQFLHAKKQKETLAE
QEKELETNKRTLFQLEEMEPKIMEFETVIIQKRRAEMEWKEATDHLEKVMKTEQDVIAEI
KLAESQLTEINQAELAHLEAINKHTTVKALIEKNQELVNKRAKMAAWDLEKQTEEQTLAQ
LLTEKTTIETTIKQQETNLQKEQAASLATHLHEGDACPVCGSVSHPKLAEFGETANFEIL
EAAKGQLHEKELAINEAEKSINQLEWQLNEWADVTEVNLDETKQILAENKLLAENLAKKI
DQLQTKTAQKATVQSNVETLKNKQNETETVKNHIALQVENSHQQVQLATGKLSYLEESIP
VDLRDKVMFDKKKNELTTSIETHLKQAEQVDASFRQADKDITRLESTLQSAQKTTADAQE
ALQVQREIFKEAMKQNDFPTYESYKQALMSVDELKVQEEKVTNFERKRHLAISRQADLTE
KLKNKQKPNLEQLEFSMKEKQQQLTKAEESTMKQRELVTKQKEVVLNYQNSIQAVEKAEE
DYADIGLLADAARGKNARRLTFERYILAMFLDTIIQRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEIVQEMAGGISLETMFID
EGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFVT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaagttaacgatgcaagctttcggagcgtatgctaaaaaagaagtaatc
gactttgaaaaactaggaacggaacagatttttgttatctctggtaaaactggcgctggt
aaatccactatctttgatgccattagttttgcgatttttggtaaagcaaatacgtttgat
cgagaaagcttttcgatgcgtagtcattttgcgacggataaagaaataacggaagtaacg
cttgtttttagattaaaagacaagatttatcaaattagccgcattccgcaacaagaaatt
gccaagcagcgcgggaatggaacgacaacatctcctcaaaaagctgaattatatgaactg
attggcgatgaaatgaagttacttgcgagttcagttcgtgatgtcaatacgaaaatggaa
gaattaattcaacttaatgtggatcaattcagacaaattttaatgattccacaaggtgaa
tttagagaattactcgtatcagatagtaaagaaaaagaagcgattttacaacgtttagct
catacagtgtattatgaaaaagtggagaatttattatgggaaaagcaaaaagaagccgaa
attttagtagttgaagctcgaaaaaaagtggcagaactcgccgaacttagtttaccagat
gtggaaattactgggaaaacaacaagcgaaattagtgttttacaaacagaagccattcaa
aaagagcaaacggttttagcggaattagaaagtgaattaagcattattcggaaacaaaca
agtgaagccgtcgaaaaagtgacacttgctaaagaacagttgcttgattggcaaaattta
gatttatatatagaagaagtagctaaactagaagctgaacaaggagtttaccgagcaata
gaagggcgaatagaagccgccaaaagagcgagcaatatacggtctcaagatgcactatgt
attcgtttaaaagagcaattagaaacagcagaacatacagaaaaacaagttgctaccgcg
acagaacaagtgaaagcacaatttttacatgcaaaaaaacaaaaagaaacactcgctgaa
caagaaaaagaactagaaactaataaacgtactctttttcaattagaagaaatggaaccg
aagataatggaattcgagactgtaatcattcaaaaacggcgcgctgaaatggaatggaaa
gaagcgacggaccacttggaaaaagtaatgaaaacggagcaggatgtaatagcagaaata
aagttagcagaatctcaattaacagaaataaatcaagcggaacttgcgcacttagaagcc
attaataaacatacaaccgtcaaagcactcatcgaaaaaaatcaagaactagttaataaa
cgagcgaaaatggcagcatgggatttagagaaacaaacagaagaacaaacattagcccaa
ctcttaacagagaaaactaccatagaaacaacaattaaacaacaagaaacaaatctgcaa
aaagaacaagccgcgtcacttgcgacacatttacatgagggggatgcttgtcctgtctgc
ggttctgtatcacaccccaagcttgcggaatttggagaaacagccaattttgaaatactg
gaagcagctaaaggacaattacatgaaaaagaattagcaattaatgaggcggaaaaatcc
atcaatcaactagaatggcaactaaatgaatgggcagatgtcacagaagtgaacttagat
gaaacaaaacaaatcctagccgaaaataagttgctagctgaaaatttagcaaaaaaaatt
gaccaattacaaactaaaacagcccaaaaagcaactgttcaatcaaatgtggaaacatta
aagaataaacaaaatgaaacagaaacagtaaaaaaccatattgctcttcaagttgaaaat
tcgcatcaacaagtacaactagctactgggaaattaagctatttagaagagtccatccca
gtagatttaagagataaagtaatgtttgataagaaaaagaatgaactaactacaagtatt
gaaacgcaccttaaacaagctgagcaagtggatgcttcatttaggcaagcagataaagac
attactcgactagaatccactttacaatctgcccaaaaaacaaccgcagatgcgcaagaa
gcattacaagtacaacgtgaaatttttaaagaagcaatgaaacaaaatgattttccgacg
tatgaatcatataagcaggcattaatgtctgtagatgagctgaaagtacaagaagaaaaa
gtgacaaacttcgaacgaaaacgtcatttagccatttcacgtcaagctgatttaacagaa
aaacttaagaataaacaaaaaccaaatttggaacaactagagtttagtatgaaagaaaaa
caacaacaactcacaaaagcggaagaaagtacgatgaaacaacgggaattagttactaaa
caaaaagaggtagttttaaactatcaaaatagtatacaagctgtagagaaggcggaggaa
gactatgcagatattggtctattagcagatgcagcaagaggcaaaaatgcgcgtagatta
acttttgaacgctacattctcgcaatgtttttagatacgattatccaacgagcaaatcat
cgtttatcgaaaatgactagtgggcgctttgaattgcaacgaaaaatggaaaaagcaaaa
ggaaatgtccaaagtggcttggaattagaagtatttgacgaatatacaggattaacgcgg
catgtaaagactctttcgggcggggaaagttttaaaacttctttagcgcttgctttatca
cttgctgaaattgtccaagaaatggctggtgggatttcgcttgaaacaatgtttattgat
gaaggatttggtacgctggatcctgaatctcttgaagttgcggtagaatgtttgctggaa
acacaagaaaatggtcgacttgttggtattatttctcatgtacctgaacttaaagaaaga
atttcagcaaggcttgaagtgactgcgacgaaccatggaagtactactaaatttgttact
gctagtagctaa
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