Listeria welshimeri: lwe1800
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Entry
lwe1800 CDS
T00422
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lwe
Listeria welshimeri
Pathway
lwe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lwe1800 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwe03400
]
lwe1800 (exoA)
Enzymes [BR:
lwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
lwe1800 (exoA)
DNA repair and recombination proteins [BR:
lwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
lwe1800 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CAK21218
UniProt:
A0AJN6
LinkDB
All DBs
Position
1832551..1833306
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AA seq
251 aa
AA seq
DB search
MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLKAYKDYWNYAVKK
GYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEAFFMVTVYTPNSQAELKRLDYRM
TFEDAILEYIKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDA
GFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSKRLKDKLVDAKIHSEVLGS
DHCPVELELNL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatttcttggaatgtaaatggacttcgagcagctgtaaaaaaaggctttttg
gagtattttgaagaagtggatgcagatattttttgtttgcaggagacaaaattacaagaa
ggtcaaatcgaactggatttaaaagcgtataaggattactggaattatgcagtgaaaaaa
ggttattctggtaccgcgatttttacgaaagtggaaccattgtctgtgcaatatggctta
gggataccggagcatgatacagaaggtcgcgttatcacccttgagtttgaagcgtttttt
atggtgacagtttataccccaaattcgcaagctgaattaaaacgtttggattatcgtatg
acttttgaagatgcgattttggaatatataaagaatttggataaaacaaaaccggttgtg
ctttgtggtgacttgaatgttgcgcacgaggaaattgatttaaaaaacccaaagacaaat
cgcaaaaatgcaggattctcggacgaggaacgcgcgaagttttctgcgttcttagatgct
ggatttattgatagtttccgttacttttatccagatttgactgatgcttattcgtggtgg
tcttaccgaatgaacgctcgtgctaggaatactggctggcggattgactattttgttgtt
tccaagcgactgaaagacaaattagtggatgccaaaatccattcggaagtacttggttca
gatcattgcccggtggaactggaacttaatttatag
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