Listeria weihenstephanensis: UE46_00370
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Entry
UE46_00370 CDS
T05637
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lwi
Listeria weihenstephanensis
Pathway
lwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UE46_00370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwi03019
]
UE46_00370
03400 DNA repair and recombination proteins [BR:
lwi03400
]
UE46_00370
Enzymes [BR:
lwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UE46_00370
Messenger RNA biogenesis [BR:
lwi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UE46_00370
DNA repair and recombination proteins [BR:
lwi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UE46_00370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Mqo
Prefoldin_3
Motif
Other DBs
NCBI-ProteinID:
AQY49669
UniProt:
A0A1S7FQM3
LinkDB
All DBs
Position
80378..82156
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AA seq
592 aa
AA seq
DB search
MIEQYWGRSQQVLQESFGYSSFRDGQEDVLRNLYARKDTLAIMPTGGGKSLCYQIPALVL
DGLTIVVSPLISLMKDQVDALNEQGIPATFVNSSLTGNEIDNRLWDAENGAVKLLYIAPE
RLETASFQRLVDTTDIALFAIDEAHCISHWGHDFRPSYLTLCDTLDRIHPRPLIIALTAT
ATPTVSDDIMKLLDIGPDSIVQTGFARENLAFQVVKGQDRDKYLLDYVKTNSEQSGIVYA
ATRKEVERLYEMLNKKGIPTGKYHGGMSDKERNGWQEKFLYDDVRVMVATNAFGMGINKS
NVRYVIHYNLPRNVEAYYQEAGRAGRDGVASDCILLFGPQDTHIQHFLIDQSEMDEERKQ
NEYAKLRQMAGYGYTEICLQKYIVQYFGEEGENCGRCGNCLDTREAQDITIEAQQVFSCI
KRMQERFGKVMVAKVLTGSKDQKIQQWRLEELSTHGLMKDRSQKDVLQLIDYLAAEKYLA
YTDSQFPSLKLTNEAVKVLLGKEKVTRKTARKVTKVSIAVDEGLFGELREVRRELASKHK
VPPYIIFSDETLRQMCEYLPKDEEAFLEIKGVGMNKLEKYGAEFLEVLQKQA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacaatattggggtagatcgcagcaggttttgcaggagagctttggttattcg
tcgtttcgcgatgggcaagaggatgtattgcgaaacctttatgcgcgtaaggatacgtta
gcgataatgcctactggaggcgggaaatcgctttgttaccagattccagcgctggttttg
gacggcttgacgattgttgtttcgccgctgatttcattgatgaaggatcaggtggatgcg
ctgaatgagcaggggattccggcgacgtttgtgaatagttccttgacgggaaatgagatt
gataaccggttgtgggatgcggaaaacggggcggtaaagctgctttatatcgcgcctgag
cggttggagacggcgagttttcagcggttggtggacacgacggatattgcactttttgcg
attgatgaggcgcattgtatttcgcattggggacatgattttcgtccgagttatttgacg
ctttgtgatacgctggatcggattcatccgcgcccgcttattattgcgctgacggcgacg
gcaacgccaacggtttcggatgatattatgaagttgcttgatattggcccagatagtatt
gttcagacgggatttgcacgggaaaacttggcttttcaggtcgtgaaggggcaggatcgt
gataagtatctgctcgactatgtgaaaacgaatagtgagcagtcgggaatcgtgtatgcg
gcgacgcgtaaagaggtggaacggctgtacgagatgttgaacaagaagggcattccgacg
gggaaatatcatggtgggatgtcggacaaggagcgcaatggttggcaggagaaatttctg
tacgacgatgtgcgcgtgatggtggcgacgaatgcgtttggtatgggaatcaacaaatcg
aatgtgcggtacgtgattcattataatttgccgcggaatgtcgaggcgtattatcaggaa
gctgggcgtgctgggcgtgacggcgttgcgagtgactgtattttgctgttcggaccgcaa
gacacgcatattcagcattttttgattgatcagtcggaaatggacgaggaacgcaagcag
aatgagtatgcaaaactgcgtcagatggcgggttatggctatacggagatttgtttgcag
aaatatattgtgcagtattttggcgaggaaggcgagaactgcggacgatgtggtaactgc
ctcgatacgcgcgaagcacaggacatcacgattgaggcacagcaagtcttttcatgtatt
aaaaggatgcaagaacggttcggaaaagtgatggttgccaaagtgttgacgggctcgaag
gatcagaaaatccagcagtggcgcttggaggagttatcgacgcatggcttgatgaaggac
cgctcacaaaaagatgtgctacaattgatcgattatttggcggcggagaagtatttagcg
tatacggacagccaatttccgtcgttgaaactgacgaacgaggcggttaaggtgctgctt
ggtaaggaaaaagtgacgcggaaaacggctcggaaagttacgaaggtatcgattgccgta
gatgaaggattgttcggcgaattgcgcgaggttcgtcgggagctggcatcgaaacacaaa
gttccgccgtatattattttctccgacgaaacgttacggcaaatgtgtgagtacttgccg
aaagatgaagaggcatttttggagatcaaaggtgtcggtatgaacaagcttgagaaatat
ggcgcggaatttttggaagtattacagaaacaagcataa
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