Listeria weihenstephanensis: UE46_06775
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Entry
UE46_06775 CDS
T05637
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lwi
Listeria weihenstephanensis
Pathway
lwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UE46_06775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwi03019
]
UE46_06775
03400 DNA repair and recombination proteins [BR:
lwi03400
]
UE46_06775
Enzymes [BR:
lwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UE46_06775
Messenger RNA biogenesis [BR:
lwi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UE46_06775
DNA repair and recombination proteins [BR:
lwi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UE46_06775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Tt1218-like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQY50769
UniProt:
A0A1S7FTR6
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All DBs
Position
1395655..1397055
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AA seq
466 aa
AA seq
DB search
MQLEQELERFLGFNEFRAGQREVVEQVLLGNDCFAMLPTGTGKTVCYQLSGYLSDGVVLI
VSPLLSLMQDQVERMRANGEKRVIALNSFLSLPEKQQALAELAQYKFIFVSPEMLANKQI
QMAIRRLTIGLFVVDEAHCISQWGHDFRPDYLELGVLRQELGSPVTLVLTATATKKVRLD
IKKQLRLTDCVDVIHSVDRPNIAIVVENTSTRMEKQAKLLALTGALKGPGIIYFSSKKLA
ERYAYEIGEQHGLRTAFYHGDMSGEDRITIQQQFIQNQLHLICATSAFGMGIDKGDIRYV
IHFHMPGDLEAYLQEIGRAGRDGAPSVAILLYADGDEAIQLQLQDRDLPEEELVHLSPAL
TEQLPVTERRFLEFYRQLGFTPDQIKEKIQFRKRWKRENLYTFLNFIKGVTCRRQFIQTY
FEEVTNHDKPENCCDVCGVNLADFYGENQEIVEEAGWQKYLEYLLK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcagttagaacaagaattagagcgctttttaggatttaacgaatttagagctgggcag
cgggaagttgtggagcaagtgcttcttgggaacgactgctttgcgatgctacctaccgga
acgggaaaaacagtctgttatcaattatctggttatttgagcgatggcgtggtactcatt
gtgtcgccactgctttcattgatgcaagaccaagtggaacgaatgcgcgcgaatggagaa
aaacgtgtgattgcgcttaatagttttctaagtttacctgaaaagcagcaagcgcttgcg
gaactcgcacagtacaaatttatttttgtgtcgccggaaatgcttgcgaataagcaaatc
caaatggcgattagaaggcttacaattggcctttttgtagtggatgaagcgcactgtatc
tcgcaatggggtcatgatttcagaccagattatttggaattgggagtgcttcggcaggaa
ttaggatcaccggtaacgcttgttttgaccgcgacggccactaaaaaagtacgtttggac
ataaaaaaacagttgcgtttaacggattgtgtagatgtgattcactcggtagatcggccg
aatattgcgatcgtggtggagaatacatcgacgaggatggaaaaacaggcaaaactgctt
gcgttaactggggcgttaaaagggccaggcattatttatttttctagtaagaaattggcg
gagcgttatgcgtatgaaattggggaacaacatgggcttcggacggcgttttaccatggg
gatatgagcggggaagatcgcattacaattcagcagcaatttattcagaatcagctacat
ttgatctgtgcgacgagtgcatttgggatggggattgacaagggcgatattcgctatgtg
attcactttcatatgccgggcgatttggaggcttatctgcaggaaattggccgggccggt
cgtgatggtgcgccaagtgttgcgattttgctttatgcagatggagatgaagcgattcaa
ttgcaactacaagatcgagatttgccagaagaggagctcgttcatctaagcccagcgtta
acagagcaattaccggtgacggaacgccgttttctggagttttatcggcagttaggtttc
acgccagaccagattaaggaaaaaattcaattccgaaaacgctggaaacgagagaatttg
tatacgttcttaaactttattaaaggagtaacgtgtcggcgtcagtttattcaaacctat
tttgaggaagtcacgaatcacgataagcctgaaaattgttgcgatgtgtgtggcgtgaat
ttagctgatttttacggtgaaaatcaagaaattgtggaagaagcaggttggcaaaaatat
ttagagtatctattgaaatga
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