Leptospira weilii: FHG68_01725
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Entry
FHG68_01725 CDS
T06081
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lwl
Leptospira weilii
Pathway
lwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG68_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lwl03019
]
FHG68_01725
03009 Ribosome biogenesis [BR:
lwl03009
]
FHG68_01725
Enzymes [BR:
lwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHG68_01725
Messenger RNA biogenesis [BR:
lwl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHG68_01725
Ribosome biogenesis [BR:
lwl03009
]
Prokaryotic type
rRNA helicases
FHG68_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
MtrA
Ebp2
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDK25583
LinkDB
All DBs
Position
I:complement(331453..332994)
Genome browser
AA seq
513 aa
AA seq
DB search
MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI
PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEIERQLKAL
RKNPQIVIATPGRMMDHMRRGSIRLDDIKIVVLDEADEMLDMGFREDMEFILKDTPIDRQ
TIMFSATMTDDILTLMKRFQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEY
RNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGNIEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQIYNLKKIER
INGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDAGHISKYVNQVEKLMGNDYTALDIAA
ALFKMTILKDSVTFDDSVQFESDFKYEERNSFKKKSGNGGRKYKDRNFGRSGSRSRTKSN
PGSHSGNGSHSKFSQGDKNQKSGGPSSFKKKKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcaagtttagcgaactaaacttatccgccgaaatccaaaacgcgatcctg
gaaatgggtttcgaagaagcctctcccattcagtcagaagcgattccggtcatattaaaa
ggaaaagatatcatcgggcacgctcaaaccggtaccggtaaaacggccgcatttgcaatt
ccgacgatcgaacttctcgaagtggaaagtaaacatttacaagccttgattctttgtccg
actagagagttagtcatccaggtcagcgaacaatttcgcaaactgatgaaatacaaagga
aacttcgaagtcgttcccgtttacggcggtcaagaaatagaaagacaactcaaagcgctt
cgtaaaaatccccaaattgtaatcgcaactcccggaagaatgatggaccacatgagaaga
ggttccatccgtctcgacgacattaagatcgtggtcttggacgaagccgacgaaatgctg
gatatgggtttccgcgaagatatggaattcattttaaaagacactcccatagatcgccag
acgatcatgttttctgctacgatgacggacgatattcttaccttgatgaaaagatttcaa
aagcatcctcagatcatcgacgtaactcaccagaaattgagcgcacccaaaatcgaacaa
atctactatgaaattcaagagaacgccaaaggagaagctctcgcgagactgatcgaatac
agaaacgtaaaactcgcattagtattttgtaatacaaaagcgcaagtggataccgtcgta
gaattgttgaaatcgaggggttactttgcggaagctcttcacggagatctgaatcagaaa
caaagggacaaagtaatgaacggatttcgaaacggaaatatcgaaatcttagtcgcgacc
gacgtggccggaaggggaatcgacgtcaacaatgtcgaggcggtattcaactacgacctt
ccaagagacggggaagactacgtccacaggatcggaagaacaggaagagcaggcaaaaaa
gggatcgcattctcctttatcgtcggaaaacagatctacaatcttaaaaaaatagaacga
atcaacggaatcaaaatcgaggcaggaaaaattcctacgttagacgatcttgaagaaacc
aaaatccattcctacacttccaaagttaggtccatcgtggatgcgggtcatatcagtaag
tatgtaaaccaagtggaaaaattgatggggaatgactataccgcgttggacatcgccgcc
gctttgtttaaaatgacgatcctcaaggacagcgtcactttcgatgattccgtacaattc
gaatccgattttaaatacgaagaaagaaattctttcaaaaagaaatccggaaatggtggc
aggaaatacaaggatcggaattttggaagatccggttcgagatctagaaccaaatcaaat
ccgggttcccactccggtaacggatcccattctaaattctcccaaggagataaaaatcaa
aaatcaggcgggccatcttccttcaaaaaaaagaagaaataa
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