Leptospira weilii: FHG68_04520
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Entry
FHG68_04520 CDS
T06081
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lwl
Leptospira weilii
Pathway
lwl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lwl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FHG68_04520 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lwl03021
]
FHG68_04520 (rpoB)
03400 DNA repair and recombination proteins [BR:
lwl03400
]
FHG68_04520 (rpoB)
Enzymes [BR:
lwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FHG68_04520 (rpoB)
Transcription machinery [BR:
lwl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FHG68_04520 (rpoB)
DNA repair and recombination proteins [BR:
lwl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FHG68_04520 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QDK26045
LinkDB
All DBs
Position
I:930202..933882
Genome browser
AA seq
1226 aa
AA seq
DB search
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRKHQGLEAVFRETFP
IESPNNDMLMEYSHYILGEPKRSPQECKDTDATFAMPLKAVIRLIIKETGEIREQTVYMG
DLPVMTEQGTFIINGAERVVVSQLHRSPGIFFSYDMERDVFSARVIPYRGSWLEFEMDNK
GILIAKIDRKKKFPATLLVKSLGYGTNEEVLRLFYGSKKEKIAGATSKDLKKILGRRTIN
DIINMETGEVMLEAGSKVNEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATVELNRLFFSPKTFDLGEVGRYKINSKFEFNNPKEFSG
EKARVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRRIRSVGELISNQLKTGFSRVE
RVIKERMTVQEIETQTPQLLISIKPITAVINEFFGSSQLSQFMDQTNPLAELTHKRRLNA
LGPGGLSRDRAGMEVRDVHYSHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYR
TVKNGKVTGQIEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGTGMETRAAYDS
RICIVNKHDGVVISVDAEQIVVERKGGKESDTYQLTKFKKTNQGTCFNQKPIVGVVHSEI
SGKVTKVSKEKIEVTSENGTVKEYVLQVGSKQYSPIVSSGEEVKRGSTLAGQVVTGEKLD
ELGNILVKGTVLADGPAVDNGVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSI
HIEEFEIQARETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDELPAGVEEMVK
VFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDGTPLDIVLNPLGVPSRMNLGQ
IFETQLGFAASKLGISFETPVFDGAEESDVDNFCKEANLPLNSKFKLFDGRTGLPFMNEV
FCGYIYILKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASH
TLQELLTIKSDDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcaagtagagagaaaacgggtaaatttcggaaaaatcacgaatctggattac
cttcctaacttgattcaaattcaaaagcgttcttttgactggtttctccaagcagacgtc
aaggacgaaaccaaaagaaagcatcaaggattagaggccgtattccgggaaactttcccc
attgaaagtcccaacaacgacatgcttatggaatacagtcattacattttgggagaaccg
aaacgttctcctcaggaatgtaaggacacggacgcgactttcgcgatgccgttaaaagcg
gtgatccgcctcatcatcaaggaaaccggagaaatccgagaacaaacggtttacatggga
gatcttcccgtgatgaccgaacagggaacttttatcatcaacggagcggaacgcgtggtc
gtttcccagcttcaccgttctccgggtattttcttttcttacgatatggaaagagacgtt
ttctccgccagggtgattccttacagaggatcttggttggaattcgagatggataacaag
ggaattctgatcgcgaagatcgatagaaagaaaaaattcccggccactcttcttgttaaa
tctttaggatacggaaccaacgaagaagttcttcgtttgttctacggttctaaaaaagaa
aaaattgcgggtgcgacttccaaggatctcaaaaaaattctaggaagaagaaccatcaac
gacatcatcaacatggaaaccggagaggtgatgctcgaagccggttccaaggtcaacgaa
gacaatatctccatcttaaaagagatgaaggtgaaagaagtcgagttgatcgaattcccg
aaaggaaaagacaacccgattctgatcaacgctttggaaaaagacggagtgaacgattac
gaggacgcgattctcaagtttcattctctcatgcgtcagggcgagccttccacgatcgaa
aacgcgactgtggaattgaatcgtcttttcttctctccgaaaacgttcgatctcggagag
gtgggacgttataaaatcaattctaagttcgaattcaacaacccgaaagaattctccggt
gaaaaggcgcgcgtattaagacccgcggatatcattgagacggttcgttacattctgaat
cttttctccgaaacggaaaattactatccggacgatatcgatcatcttggaaacagaagg
atccgttccgtcggggaattgatctcgaatcaacttaagaccggattctccagagtggaa
agagtgatcaaagaaagaatgacggttcaggagatcgaaactcaaactcctcagcttctc
atttcgatcaaaccgatcacggcggtgatcaacgaatttttcggttcttctcaactttct
cagttcatggatcagacaaaccctctcgcggagctgacccacaaacggagattgaacgca
ctcggtcccggaggtctttccagagacagagcgggtatggaagtgcgggacgttcactat
tctcactacggtagaatgtgtccgattgaaactccggaaggtccgaacatcggtctgatt
ctttccatgtcttcgtatgctcgcgtaaacgactacggatttttggaaactccttacaga
accgtgaaaaacggtaaggtcaccggtcagatcgaacatcttaccgcggacaaagaagaa
tatcattacatcgctcaggcgtccggcgtgatcgatgaaaaaggcgaactcaaaaacaaa
ctgatttccacgcgtcacagaggggactttcctttccgtaacccgagcgagattcagtat
atggacttggctcctttgcaagtcgtttcggtttccaccgcgctgattccgttcctggaa
cacgacgacgcgaaccgcgccctcatgggctccaacatgcaacgtcaggcggttcctctt
ctccgcgaagaagctccgtttgtcggaacaggtatggaaactagagccgcttacgattcc
agaatttgtatcgtaaacaaacacgacggtgtcgttatatcggttgacgcagaacaaatc
gttgtggaaagaaagggcggaaaagaatccgatacgtatcaacttacgaaatttaaaaag
acaaaccaaggaacctgtttcaatcagaagccgatcgtaggagtcgttcactccgagatc
agcggaaaggttacgaaagtttccaaagaaaaaatcgaagtaacatccgaaaacggaaca
gtaaaagaatacgttctccaagtcggaagcaaacaatattctccgatcgtatcttcgggc
gaagaagtaaaacgaggatcgactctcgcgggacaagttgtcacaggcgagaagttggac
gagttgggaaatatcctcgtaaaaggaacggtccttgcggacggacctgcggttgacaac
ggagttctcgctctcggaagaaacgttctcgctgcgttcatgccttgggaaggttacaac
ttcgaggatgcgatcctgatttccgaaagaatcgtacgcgacgacgtattctcttccatt
cacatcgaagaattcgaaatccaagccagagaaacaaaactcggtcccgaacaaatcact
cgtgatattccgaatctttcggacaaagcgttccgcgatctggatgaaaccggtgtgatt
cgtatcggtgcggaagtaaaaccgggagacattctcgtgggaatggtgactccgaaaggc
gaaaccgatctcacaccggaatacaaacttcttcattctatctttggtgagaaggcgaaa
gatgttcgggattcttccttaagaatgccgaacggtttcgaaggaaccgtcatcgacatc
aaacgattctcccgcgagaaccaggacgaacttcccgcgggcgtcgaagaaatggtgaaa
gtctttgttgccagaaagagaaaacttctggtcggagataaaatggccggacgtcacgga
aacaaaggggtcgttgcccgcgttatggcggaagaagacatgccttacatggaagacgga
actcctctggacatcgtcttaaacccgttaggcgttccttctcggatgaacctcggtcag
attttcgaaacacaactcggtttcgcggcgagcaaactcggaatttcttttgaaactccg
gtgttcgacggcgcggaagaatccgacgtggacaacttctgcaaggaagcgaatcttccg
ttgaattctaaattcaaactttttgacggtagaaccggacttccttttatgaacgaagtc
ttctgcggttatatctacatcttaaaactcgctcacttggtggaagacaagatccatgca
agatcgaccgggccatactctctggttactcagcaaccgctcggaggaaaggctcagttc
gggggtcagcgtctcggggagatggaagtctgggctctcgaagcttacggcgcttctcat
actcttcaagagttattgaccatcaagtccgacgatatgctcggacgtgcgagaatctac
gaagcgatcgtaaagggaatccattccatcaagcctggtatcccagaatccttcaacgta
ttggttcaagagcttagaggacttgctctggatatcatcatcacagactcggaaggcaac
accgttgatatttccgactacgaggatgaatattctaagagtaagaagaaaattaaattc
gaaactatagagaacgcataa
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