Leptospira weilii: FHG68_12780
Help
Entry
FHG68_12780 CDS
T06081
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lwl
Leptospira weilii
Pathway
lwl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FHG68_12780 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwl03400
]
FHG68_12780 (mfd)
Enzymes [BR:
lwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHG68_12780 (mfd)
DNA repair and recombination proteins [BR:
lwl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
FHG68_12780 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
UB2H
RecG_dom3_C
AAA_22
DED
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
QDK27445
LinkDB
All DBs
Position
I:complement(2585327..2588842)
Genome browser
AA seq
1171 aa
AA seq
DB search
MKDLLRIIGDGLFARFELSFPSKKNPARKVKAVPERETNSDRYPSVDLSITGNVYSVTEG
SHSILASSLFQKLNRTIVVVSENNTAAEFLFREALSFLPASDLVYLPGQEVLPYEYLRYP
SEMKRERIKAIGKILNGEPSLIFTSVAGFLKTLPPVQTMRGRAIALEKGKEIDLESLLIQ
LIDLGYKRTDVCETFGEFSIKGGILDIYSSYSQEPVRIDLFGEEIESIRTFDPDTQRSMV
DLNRAILLPVDEYILSDEQKKEYQILLKSSGSSLHVPEIPEEGYGIYYEELVPLVRENHG
ILSYFSKPPVLLFPSPNSVNQRILHLEREYFSLFEKRSQEILCAPPDKLLSFGEEFRVLS
KLIGLSFVGLPPRNGNDLVSCLKEAPAFKGKIREVREKISQLRTEGGWKIVLTSSFEAQT
KRLQGLFEKQGIVLLNEDATEPIPFHLGKHKSDAFLVLSELRNGFIFENQKILILSENDI
FGREYKRKTRFKKQNSKALQSFIDLKEGDPVVHIHHGVGRFLKIERTNAGGKERDFLKLE
YAGGDSLFVPLDQISLVQRYIGGTESPRLDSLGKSTWKKTKDRVQKAVEILAEDLVQMYS
NRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLESSVPMDRLVCGDVGYG
KTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNTFKNRFQNYPLRVELVSRFKTSAEIR
EILSDFSLGKIDMVVGTHAILSPKLKPKNLGLLIIDEEQRFGVNHKEAIKRFKNLVDVLT
LTATPIPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDEDLIADAIRNEIQRDGQVF
YLYNRVETIEQETKYLGEIVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTTTIIES
GIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYLLLPKDRVVTEQAEKRLNTI
YEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVQMLEEAIARVKGEEVAV
EVRTSVTLNTNFFIPETYISDTRQKIEFYKKFEGARDLQEIDEVYREMEERFGDPPEDAR
TFILLEKIRTLASNLGFESVAEMKDEIKMKSGSYFKGDHSKIIQLISAKIGLTLNPREPN
VLIFQIGKKSEKEKLDTLIFLLSEMLSSKKL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcttcttcgaatcataggagatggattgtttgctcggtttgaactttccttt
ccttcaaaaaagaatccggcgcggaaagtaaaggccgttcccgagagagaaacgaattct
gaccgatatccttccgtggacttatcgattacgggtaacgtttattccgtaacggaggga
agtcattccatattggcttcttctttatttcaaaagttgaatcgaacaatcgtggtcgtt
tccgaaaataacaccgccgctgaatttttattccgggaggctttgagttttctccccgca
tccgacttggtctatcttcccggtcaggaagttcttccttacgaatatctgcgttatccc
tccgagatgaaacgggagaggatcaaggcgatcggaaagatcctgaacggagaaccctct
ctcatttttacttccgttgccggttttttaaaaactcttccccctgtacaaacgatgcgg
ggaagggcgatcgcgttggaaaaaggaaaggagatcgatctcgaaagccttctcatccag
ttgatcgatctgggttataaacgtacggatgtttgcgaaacgtttggagaattcagtatc
aaggggggaatcttagacatctattcttcgtattcccaggaaccagttcggattgatctt
ttcggagaagagattgagtcgatccgaacctttgacccggatactcagagatcaatggtc
gacttgaatagggccattcttcttcccgtggacgaatatattctttcggacgaacagaaa
aaagaatatcagattcttttaaagtcttccggttcgtccctccatgttccggaaattccc
gaagaggggtatggaatttattacgaagaactcgttcctttggtcagggagaaccacggg
attctttcctatttttcaaagcctcccgttttgctttttccttctccaaactctgtgaat
caaagaatactccatctcgaaagggaatacttttctctttttgaaaaacgttcccaagag
attctttgtgctcctcccgacaaactactgtctttcggagaagagtttcgagttctttcg
aaattgatcgggctctcgtttgtcggtcttcctcctcgaaacggaaacgatttagtttcc
tgtttaaaagaagctcccgcgtttaagggtaagatccgggaagtccgcgagaaaatttcg
caactccggacggagggcggttggaagatcgttttgacctcttccttcgaggcccagact
aaaagactacagggacttttcgaaaaacaaggaatcgttttgttaaacgaagatgcgacg
gagccgattccgtttcaccttggaaaacacaagtctgatgcgtttctcgttttatcggaa
ctcagaaacggttttatatttgaaaatcagaaaattctaattctctctgaaaacgacatt
ttcggaagggaatacaaacgtaaaacccgctttaaaaagcagaatagcaaagcccttcag
agtttcatcgatttgaaagaaggggacccagtggttcatatccatcacggggtcggtaga
tttttaaaaatcgaaaggaccaacgcgggggggaaagaaagagactttctgaaattggaa
tatgcgggcggggattctttgtttgttcctttggatcagatttctctggtccagagatac
ataggcggtaccgaatctccccgtttggatagtctcggtaagagcacttggaaaaaaaca
aaggatagggttcaaaaggccgtcgaaatccttgcggaagatttggttcagatgtattcc
aatcgactcaaactccaaggttacgcgtttcctcccgacacgatctatcaggaagaattc
gaagccgagttcgaatacgaggaaactccggatcagatcgaagcgatagaggcggtcaaa
aaagacctggaatcttccgttccgatggatcgtctcgtttgcggagatgtgggctatggt
aaaacggaagtcgccatacgcgccgcgtttaaggttgcaatggcgggacgtcagatcatg
atgcttgcgccgactacgattcttgctttacaacattataatacgtttaagaaccgattc
cagaattatcctctgagagtcgagctcgtttcccgttttaaaacttccgccgaaatccgc
gagattctttccgattttagtctcggcaaaatcgatatggttgtcggcacgcacgccatt
ctttcccctaagctaaagccgaaaaatctgggtcttttaattatagacgaagaacaaaga
ttcggagtcaaccataaggaagcgattaaaagattcaaaaatctcgtggacgttttgact
ctgactgcgactccgataccgagaactctccacatggcgttaaccggaattcgggaactt
tccatcatcgcaaccccgcctaagaatcgtcagtcggttgagacctacgttctcgaagag
gacgaggatctgattgcggacgcgatccgaaacgaaatccaaagggacggtcaggtcttt
tatctttacaatcgagtcgagacgatcgaacaggaaacaaaatatctgggcgaaatcgtt
cccgaggtttccatagggattcttcacggacaaatgaccgaagacgaaatcgaagaaact
cttttggatttttacaatcgtaaatacgacattctagtcactactacgatcatagaatcc
ggtatcgatatgccaaacgtgaacactcttttcgtaaaacgtgcggatcttttcggtctt
tcccagttatatcagattcgaggtagggtgggtagaagcgatcgaaaggcctttgcatat
ttgcttcttcccaaagaccgagtcgtgacagagcaagccgaaaaaaggctgaatacgatc
tacgaatatcaggaattgggttcgggttttaaagtggcgatgcgggatctcgaaatccgc
ggagccgggaatttgctcggaaaggaacaatccggagatatcatggaagtcggattcgat
ttgtatgttcaaatgcttgaggaagcgatcgcaagagtcaagggagaagaggtcgccgtg
gaagtcagaacttccgtgacgcttaatacgaacttctttatcccggaaacttatatttcg
gatacaagacaaaagatcgaattctacaagaagttcgaaggtgcgagggatctccaagag
atagacgaagtttatcgagagatggaggagcgtttcggagatcctcccgaggatgcgaga
acttttatacttttggaaaagattcgaactcttgcatctaatctaggctttgaatccgta
gctgaaatgaaggatgaaattaaaatgaaatccggttcctatttcaagggcgatcattcg
aaaatcattcaactgatttcggctaaaatcggactcactctcaatcctagagaaccgaat
gtgttgatttttcagattggaaaaaaatcggaaaaggaaaagctcgatactttgatcttc
cttctttccgaaatgctatcttctaaaaaattatag
DBGET
integrated database retrieval system
