Leptonychotes weddellii (Weddell seal): 102725730
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Entry
102725730 CDS
T08708
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04151
PI3K-Akt signaling pathway
lww04382
Cornified envelope formation
lww04510
Focal adhesion
lww04512
ECM-receptor interaction
lww04820
Cytoskeleton in muscle cells
lww04926
Relaxin signaling pathway
lww04933
AGE-RAGE signaling pathway in diabetic complications
lww04974
Protein digestion and absorption
lww05146
Amoebiasis
lww05165
Human papillomavirus infection
lww05200
Pathways in cancer
lww05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102725730
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102725730
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102725730
09142 Cell motility
04820 Cytoskeleton in muscle cells
102725730
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102725730
09154 Digestive system
04974 Protein digestion and absorption
102725730
09158 Development and regeneration
04382 Cornified envelope formation
102725730
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102725730
09162 Cancer: specific types
05222 Small cell lung cancer
102725730
09172 Infectious disease: viral
05165 Human papillomavirus infection
102725730
09174 Infectious disease: parasitic
05146 Amoebiasis
102725730
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102725730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lww04147
]
102725730
00536 Glycosaminoglycan binding proteins [BR:
lww00536
]
102725730
Exosome [BR:
lww04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102725730
Glycosaminoglycan binding proteins [BR:
lww00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102725730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102725730
NCBI-ProteinID:
XP_030895918
UniProt:
A0A7F8RST5
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPIGPRGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPVDVEFQKGDQGLPGDQGPPGPPGIRGPPGPPGGMKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGEKGERGLPGIQGPPGLPGPPGTSVTGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLPGPPGPPGPHIPPSDEICEAGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGVSGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGLTGPKGLTGIPGAPGPPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGLPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGVPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPSGPPGFPGPKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGLPGHAGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGIQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGFDVPGLPGERGSPGIPGAPGPMGPPGTPGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGGPGLKGDDGLQGQPGPPGPEGEKGGKGEPGLPGPPGPVDPDLL
GSKGQKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSRGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGAKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPPGFQG
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatccgaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccgggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggctttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggcagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcctactggcttaccagggccaattggtccccgaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgaaaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacagaaaagaccagttgatgtggagtttcagaaaggagatcag
ggacttcctggtgaccaaggacctcctggacctccagggatacgtggtcctccgggtcct
ccaggtggtatgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggtaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgagccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtaattcctaggcctgggactggtgtaactgtaggggaaaaaggaaac
attgggttacccggcttgcctggagaaaaaggagagcgaggacttcctggaatacagggt
ccaccaggccttcctggacctccagggacttcagttaccggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggaatttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcacatccctcctagtgatgagatatgtgaagcaggccctccaggccctccggga
tctccaggtgataggggactccaaggagaacaaggagtgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtcagcctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtctaaccggtcccaaaggattaacaggcataccaggagctccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttccccaggagcccctgggcttcctggtttacccggtacccctggacag
gatggactgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtctgcctgggaatccaggcttgccaggtctcccagggaatagagggccaatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaagcctggcctgcctggtaatccaggcagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacccggtagtaaaggagaa
ccaggtgtccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccgggacctccaggagcacctggaacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccgaagggagaaccaggacttgggctgcctgggccacctggg
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcttccaggacatgctggcttggatgggctccctggaccaaaaggtgat
gttgggccaaacggacaacctgggccaatgggacctcctgggcttccaggaataggtatt
cagggaccaccagggccaccagggattcctggaccaataggccaacctggcctgcatgga
ataccaggagagaagggagatccggggcctcctgggtttgatgttccaggactccctgga
gagagaggcagtccagggattcctggagcacctggtcctatgggaccccccggaacacca
gggcttccaggaaaagcaggtgcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtggtcctggt
ctcaaaggtgatgatggtttacagggtcagccaggacctcctggccctgaaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccagtggatccagatctgctg
ggctcaaaaggacagaaaggggaccctggcttaccaggtattcctggagtttcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcataggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtgtttcaggcattggtcttccaggtcttcccggc
ccaaagggtgaacctggtctgcctggatacccaggaaaccctggaatcaaaggttctagg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacagccaggcctt
cctggattccctggaaccccaggacttcctggagcaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaacccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcagccgggctttggaatcccaggaccccctggactcccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttcctggt
ccaaagggagaaccaggctttcagggtttccctggtgtgcagggtcccccaggccctcct
ggttctccgggtccagctctggaaggccctaaaggcaaccctgggccccagggtcctcct
gggagaccaggtcctccaggttttcaaggttag
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integrated database retrieval system
