Leptonychotes weddellii (Weddell seal): 102726417
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Entry
102726417 CDS
T08708
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03320
PPAR signaling pathway
lww04659
Th17 cell differentiation
lww04919
Thyroid hormone signaling pathway
lww04920
Adipocytokine signaling pathway
lww04928
Parathyroid hormone synthesis, secretion and action
lww05200
Pathways in cancer
lww05202
Transcriptional misregulation in cancer
lww05207
Chemical carcinogenesis - receptor activation
lww05216
Thyroid cancer
lww05222
Small cell lung cancer
lww05223
Non-small cell lung cancer
lww05226
Gastric cancer
lww05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102726417 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
102726417 (RXRB)
03320 PPAR signaling pathway
102726417 (RXRB)
04919 Thyroid hormone signaling pathway
102726417 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
102726417 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102726417 (RXRB)
05202 Transcriptional misregulation in cancer
102726417 (RXRB)
05207 Chemical carcinogenesis - receptor activation
102726417 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
102726417 (RXRB)
05216 Thyroid cancer
102726417 (RXRB)
05222 Small cell lung cancer
102726417 (RXRB)
05223 Non-small cell lung cancer
102726417 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102726417 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lww03000
]
102726417 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lww03310
]
102726417 (RXRB)
Transcription factors [BR:
lww03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102726417 (RXRB)
Nuclear receptors [BR:
lww03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102726417 (RXRB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
102726417
NCBI-ProteinID:
XP_006738120
UniProt:
A0A2U3Y320
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAASSLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSL
SRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQ
KYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctcccccttctcctcct
gggctacccctacccccgtcagcagcctcatcccttggaggttccggggccccaccccca
cccccgatgccaccccccccactgggctcccctttcccggtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaaaggctttgcgccatctgcggggaccgaagctcaggcaaacactatggggtttacagc
tgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcaccgtggacaagcgccagcgcaaccgctgtcagtactgccgc
taccagaagtgcctggccaccggcatgaagagggaggcggtacaggaggagcgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccaaatgaccccgtgactaacatctgtcag
gcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgaccaggtcatattgctacgggcaggctggaatgagctcctcatt
gcttccttctcccaccgatccattgatgtccgagatggcatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattcggcaggcgtgggagccatctttgatcggtccctc
tccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagag
cttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctctccaaccct
agtgaggtggaggttctgcgggagaaagtgtacgcttcactggagacctattgcaagcag
aagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctcaga
tccatcggccttaagtgtctagagcatctgtttttcttcaagctcattggagacaccccc
attgacaccttcctcatggagatgcttgaggctccccaccagctggcctga
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