Leptonychotes weddellii (Weddell seal): 102727098
Help
Entry
102727098 CDS
T08708
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04082
Neuroactive ligand signaling
lww04721
Synaptic vesicle cycle
lww04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102727098 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102727098 (SLC6A4)
04721 Synaptic vesicle cycle
102727098 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lww02000
]
102727098 (SLC6A4)
Transporters [BR:
lww02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102727098 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
102727098
NCBI-ProteinID:
XP_006734595
UniProt:
A0A2U3XT17
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKELSACKDKEDCQENGVLQKGVPVPEDKVESGHVSNGYSAVPSPGAGDDSQ
HSIPATTTALAAEAHQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIGFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSENNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGLSWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAS
LTFGGAYVVKLLEEYATGPAVLTVAFIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctatcagcgtgtaaggataaagaagat
tgtcaggaaaacggagttctgcagaagggtgtccctgtccctgaggataaggtggagtct
ggccacgtctccaacgggtactcagcggtgccgagccctggtgccggagatgactctcag
cactccattccggccaccaccactgccctagcggctgaggctcatcaaggggaacgggag
acctggggcaagaagatggatttcctcctctcggtcattggctatgccgtggacctgggc
aacatctggcgctttccctacatctgttaccagaatggagggggggcattcctcctgccc
tacacgatcatggccatttttggggggatcccactgttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttctatatggaggaaaatctgcccgattttcaaaggg
atcggttacgccatctgcatcatcggcttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
acgaactcctggaacactggcaactgcaccaactacttctccgagaacaacgtcacctgg
acgctgcactcgacgtcccccgcagaagaattttacacgcgccacgttctgcagatccat
cggtctaagggacttcaggacctgggggggctcagctggcagctcaccctctgcatcatg
ctgatcttcactgttatctacttcagtatctggaagggtgtcaaaacgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctctcggtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttttatttgaaacccaactggcagaaactc
ctggagacaggggtatgggtagatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctattggctttcgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcgtttccggatttgtcatcttc
acggtgctcgggtatatggccgagatgaggaacgaggatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
acattctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggaaggggtgatcacagctgtgctagatgagtttccgcacatctgggccaag
cgccgggagtggtttgtgcttggtgtggtcattacctgcttctttggatccctggccagc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacggggcccgct
gtgctcaccgtcgcctttatagaggctgttgctgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctgggtggttttggaggatctgc
tgggtagccatcagccctctctttctcctgttcatcatttgcagttttttgatgagcccg
ccccagctccgacttttccagtataactatcctcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatatagcttaccggctgatcatcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
DBGET
integrated database retrieval system
