Leptonychotes weddellii (Weddell seal): 102727140
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Entry
102727140 CDS
T08708
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lww04515
]
102727140 (PCDH18)
Cell adhesion molecules [BR:
lww04515
]
Cadherins
Protocadherins
102727140 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
PAH
Syndecan
Cadherin_C_2
PepSY
ATG31
DUF3418
Motif
Other DBs
NCBI-GeneID:
102727140
NCBI-ProteinID:
XP_006727222
UniProt:
A0A2U3X6X5
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MCQMNAKMHFRFVFALLMLSFSYDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSLLKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVSATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFAVEARDGGSPKQLASNTTVVLTVIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIVAGNEENIFLIDPRSCDIHTNVSMESVSYTEWELSVIIQD
KGNPQLHTKVLLKCMIFDYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTMNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHHSHQSLNSLVTISSNHVPESFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEEDAQPADAGEKKKSFSTFGKDSPNEEDSGDSSTSSLLSEMSSVFQRLLPPSL
DTYPECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaaatgaatgctaaaatgcactttagatttgtttttgcactcctgatgctatct
ttcagctatgatgtactgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatccgtaattgcaagactatcagaggatgtggctgatgttttagttaagctacctaat
ccttccaccgttcgctttcgagccatgcaaaggggaaattctcctctccttgtagtaaat
gaggataacggagaaatcagcataggggctaaaatcgaccgtgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccactgagcatctgcagctt
ttccatattgaagtcgaagtgctggatattaatgacaattctccccagttttcaagatct
gtcatacctattgagatatctgagagtgcagcagttgggactcgcatccctctggacagt
gcatttgatccagatgttggggaaaattccctccacacgtactctctctctgccaatgat
ttttttaatattgaggttcggaccaggacggatggagccaagtatgcagaactcatagtg
gtcagagagctggatcgggagctgaagtcaagctatgagcttcagctcactgcctcagac
atgggggtgcctcagaggtctggctcatccctactaaaaataagcatttccgactccaat
gacaacagccctgcttttgagcagcagtcttatataatacaactcttagaaaactcccct
gttggcactttgctccttgatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtatattccttcagcagtcatgtgtctcccaaaattatagagacttttaaaatcgat
tcagaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataagcctgaaattaacataaacctcatgtcc
cccggaaaagaggaaatatcttatatctttgaaggggatcctattgacacatttgttgct
ttggtcagggttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacttacgaaaacaattatttaatcttgacgaat
gccacactggatagagaaaagagatctgaatacagtttgaccgtaatcgctgaggacaag
gggacacccagtctctctacagtaaaacattttactgttcagatcaatgatataaatgac
aatccaccccacttccagagaagtcgatatgaatttgcaatctcagagaataactcgcca
ggggcatatatcaccactgtttcagccacagatcccgatcttggagaaaacggccaggtt
acatataccattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatctaatggagccatctatgccctcagaatctttgatcatgaggaagtgagtcag
atcacttttgcggttgaagcgagagatggaggaagtccaaagcaactagcaagcaatacc
acagttgtgctcaccgtcattgatgaaaatgacaacgtccctgtggttatagggcctgcg
ctgcgcaataatactgcagaaatctccatacccaaaggggccgaaagtggctttcatgtc
acgagaataagggcaattgacagagactctggtgtgaatgctgaactcagttgctccatc
gtagcaggtaatgaggagaatatctttttaattgatccacgatcatgtgacatccatacc
aacgtgagcatggaatctgtttcctacacagagtgggagctctcagtcatcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtatgatctttgactatgca
gagtcagtgacgagcacagcaatgacctcagtaagccaggcatctttggatgtctccatg
attataattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gcaactaggtgtaaccgagaaaagaaagacaccagatcctacaactgcagggtagcagag
tccacttaccagcaccacccaaaaaggccatccaggcagattcacaaaggggacattaca
ctggtgccgaccatgaatggcactctgcccatcagatctcatcacagatcgtctccatct
tcgtctcccaccttggaaagagggcagatgggcagccggcagagtcaccacagtcaccag
tccctcaacagtttggtgacaatctcatccaaccacgtgccagagagtttctcattggaa
ctcacccatgccactcctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
gggcaatatcagccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gccctccaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatttggggcgagattcaccaatagataggctgctgggtgaagga
ttcagtgacctgtttcttacagatggaagaattccagcagctatgaggctttgcacggag
gagtgcagggtcctgggacactctgaccagtgctggatgccaccgctgccctcgccatcc
tccgactatcggagtaacatgttcattccgggggaggaattcccagcgcaaccccagcag
cagcatccgcatcagagtcttgaggaggacgcccagcctgcagatgcaggtgagaagaag
aagagtttttccacctttgggaaggactccccaaacgaggaggactccggggatagcagc
acatcctctctgctctcggaaatgagcagcgtgttccagcgcctcttacccccttccctg
gacacctatcctgagtgcagcgaggtggatcggtccaactccctggaacgccgcaaggga
cctttgccagccaagacggtgggttacccgcaaggcgtggccgcctgggcagccagtacg
cattttcagaatcccaccaccaactctggtcccccacttggaactcactccagcgtgcag
ccttcttcgaaatggctgccggccatggaggagatccccgaaaattatgaagaagatgat
tttgacaatgtgctcaaccacctcaacgacgggaaacacgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaagatgtccgccagagctag
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