Leptonychotes weddellii (Weddell seal): 102727211
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Entry
102727211 CDS
T08708
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X2
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lww03009
]
102727211 (DDX56)
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102727211 (DDX56)
Ribosome biogenesis [BR:
lww03009
]
Eukaryotic type
Pre-60S particles
Helicases
102727211 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
102727211
NCBI-ProteinID:
XP_006736484
UniProt:
A0A2U3XYE1
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MADPEALGFEHMGLDPRLLQAVADLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPVLQLLLHRKATGPAVEQAVRGLVLVPTKELARQARSMIQQLAAYCARDIRVANVSA
TEDSASERAVLMEKPDIVVGTPSRILNHLQQNSLVLRDSLELLVLDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLRQFQVVCQT
QEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLCSRCHI
ISQFNQGFYDCVIATDAEVLGAPVKGKRRGRGSKGDRASDPEAGVARGIDFHHVSAVLNF
DLPPTPEAYIHRAGRTARANNPGMVLTFVLPTEQSHLGMIEELLSGENGAPVLLPYQFRM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSERLRTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPPALRGLIHPHKKRKKLASKKVKKAKTQNPLRSFRHRKERSGP
TAVPS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccggaggcgttgggcttcgagcacatgggtctcgacccccggctcctgcag
gccgtcgccgacctgggctggtcacgacccacgctgatccaggagaaggccatcccgctg
gcgctggaggggaaggacctgctggctcgggcccgcacgggctcggggaagacggccgcc
tatgccattcccgtgctgcagctgctgctccacaggaaggcgacaggccctgcagtagag
caggctgtgagagggctcgtcctggtgcccaccaaggagctggctcggcaggcccggtcc
atgatccagcagctggctgcctactgcgctcgagacatccgggtggctaacgtctccgct
accgaagactcagcctctgagcgagctgtgctgatggagaagcccgacatagttgtgggg
accccatcgcgcatcttgaaccacttgcagcagaacagtttggtcctgcgagactccctg
gagctgctggtgctggatgaggctgaccttcttttctcttttggtttcgaggaagaactc
aaaagtctgctctgtcacctgccccggatttatcaggcttttttgatgtcggctaccttt
aacgaggacgtccaagcactcaaggagctggtactccataatccagtgactctcaagctc
caggagtcccagctgccggggccagaccagctgcggcagttccaggtagtctgtcagaca
caggaagataagttcttgctgctctatgccctgctcaagctgtcattgatccgcggcaag
tccctgctctttgtcaacactctggagaggagttaccggctgcgcctgttcctggagcag
ttcagcatccccacctgcgtgctcaatggagagctcccgctgtgctccaggtgccacatc
atttcacagttcaaccagggcttttacgactgcgtcatagcgaccgacgccgaagtcctg
ggggccccggtcaagggcaagcgtcggggccgaggatccaagggggacagggcttctgat
ccggaggcaggcgtggcccggggcatagacttccaccacgtgtctgctgtgctcaacttt
gacctgccccccacccctgaggcctacatccatcgagctggcaggacggcgcgagccaac
aacccgggcatggttttgaccttcgtgctgcccactgagcagtcccacctgggcatgatc
gaggagctgctcagcggagagaacggggcccctgtcctgcttccctatcagttccgcatg
gaggagatcgagggcttccgctaccgctgccgggatgccatgcgctcagtgaccaaacag
gccatccgagaggcgaggctgaaggagatcaaggaggagcttctgcactcagagaggctc
aggacgtactttgaagacaacccccgggacctccagctgctgcggcacgacctgcccttg
caccctgccgtggtgaagcctcacctgggccacgtccctgactacctggttccccctgct
ctgcgcggcctcatccaccctcacaagaagcggaagaagctggcctccaagaaggtcaag
aaggccaagacccagaatcccctgcgcagcttcaggcacagaaaagagagaagcggaccc
acagccgtgccttcctga
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