Leptonychotes weddellii (Weddell seal): 102727508
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Entry
102727508 CDS
T08708
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X3
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102727508 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102727508 (FIP1L1)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102727508 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102727508
NCBI-ProteinID:
XP_006734443
UniProt:
A0A2U3XSQ4
LinkDB
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Position
Unknown
AA seq
594 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRS
ARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRERDRDRDRERE
RTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETR
HKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatctggaattgaagatgaaactgctgaaaacggcgtacctaaaccgaaagtgaccgag
actgaagatgatagtgatagtgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaaaacagggggaagagtttatggaactacaggaacaaaagtcaaaggcgtggac
cttgatgcacctggaagcattaatggagttccgctcttggaggtagatttggattctttt
gaagataaaccatggcgtaagcctggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaagcagctcttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattccagcgttgggaagtggcaggaccggtatggg
agggccgaatcacctgacctaaggagattacctggggcaattgatgtaattggtcagact
ataacaattagccgagtggaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagttgacaacaattttagcaaaccacctccatttttc
cccccaggagctcctcccacccaccttccacctcctccatttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggttttcctcctccaccaggcgctcca
cctccatctcttataccaacaatagaaagtggacattcctctggttatgatagtcgttct
gcacgtgcttttccctatggcaatgttgcctttccccaccttcctggttctgctccttcg
tggcctagtcttgtggataccagcaagcaatgggactattattcaagaagagagaaagat
cgagatagagacagagacagagaccgggaacgagaccgtgatcgggacagagaaagagaa
cgcaccagagagagagagcgggagcgtgatcacagtcctacaccaagtgtttttaacagt
gatgaagaacgatacagatacagggagtatgcagaaaggggctatgagcgccacagagca
agtcgagagaaagaagaacgacacagagaaagacgacacagagagaaagaggaaaccaga
cacaagtcatctcgaagtaatagtagacgtcgccatgaaagtgaagaaggagacagtcac
aggagacacaagcacaaaaaatctaagagaagcaaagaaggaaaagaagctggcagtgag
cctgcccctgaacaggagagcaccgaagctgcacctgcggaatag
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