Leptonychotes weddellii (Weddell seal): 102727971 Help Entry 102727971         CDS       T08708                                  Symbol COL9A1 Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism lww  Leptonychotes weddellii (Weddell seal) Pathway lww04151   PI3K-Akt signaling pathway lww04510   Focal adhesion lww04512   ECM-receptor interaction lww04518   Integrin signaling lww04820   Cytoskeleton in muscle cells lww04974   Protein digestion and absorption lww05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:lww00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102727971 (COL9A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102727971 (COL9A1)    04518 Integrin signaling     102727971 (COL9A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102727971 (COL9A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102727971 (COL9A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     102727971 (COL9A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     102727971 (COL9A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:lww00535]     102727971 (COL9A1) Proteoglycans [BR:lww00535]  Extracellular matrix (ECM) proteoglycans   Others    102727971 (COL9A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen Laminin_G_2 Laminin_G_3 Toxin_R_bind_N DUF4882 Motif Other DBs NCBI-GeneID:  102727971 NCBI-ProteinID:  XP_006729580 UniProt:  A0A2U3XDM3 LinkDB All DBs Position Unknown AA seq 885 aa AA seqDB search MKNFWKIPVFFFVCSFLGSWASAAVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI SQFQVDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT GNTLEKTWTIWQIQDSSGKEQVGVKINGQTKSVAFSYKGMDGSLQTATFSNLPSLFDSQW HKIMIGVERSSATLFVDCNRIQSLPIKPRGQIGVDGFAVLGKLADNPQVSVPFELQWMLI HCDPLRPRRETCHELPVRVTPSETTDQRGPPGQQGPPGPPGPPGVPGIDGIDGDRGPKGP PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP GPPGPPGAAGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHEGDPLCPNSCPPGRS GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGIMGIVGAK GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDTGLP GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGVKGVAGEKGSRGEIGPVGPP GLPGKLGSPGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGGQGSSGEEGEAGERGELGEI GLPGPKGSVGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGIQGLPGRA PTDQHIKQVCMRVMQEHLAEMAASLKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLR GLPGIKGPPGALGLRGPKGDLGERGERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGE RGPPGVAGIPGVPGPPGPPGPPGFCEPASCTLQAGQRAFSKGPDQ NT seq 2658 nt NT seq  +upstreamnt  +downstreamnt atgaagaacttctggaaaattccagttttcttctttgtatgcagtttcctgggatcttgg gcatctgctgctgtcaagcgtcgcccaagattccctgttaattcaaactctaatggtgga aatgaactctgtccaaaggtcaggattggtcaagatgatttaccaggctttgacttgatt tctcagttccaggtagataaagcagcatctagaagagctattcagagggtagtaggatca actgcattacaagtggcttacaaattgggaaataatgtagacttcaggattccaacaagg catttatatcccaatggtctgcctgaagaatactcctttttaactacttttcggatgact ggaaacacacttgaaaagacctggaccatttggcagattcaggattcctcagggaaggag caagttggcgtgaagattaatggccaaacaaaatctgttgcattttcatacaagggaatg gatggaagtctccaaactgcaaccttttcaaatttgccttccttgtttgattcccagtgg cataagatcatgatcggtgtggaaaggagtagtgctactctttttgttgattgcaacagg attcaatccttacctataaagccaagaggccaaattggtgttgatggctttgctgtgctg ggaaaacttgcagataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc cattgtgacccactacgccccaggagagaaacttgccatgagctgccagtccgggtaact cccagcgagaccaccgaccagagaggtcccccgggccagcagggtccccccgggccccca ggtccccctggagttccaggcatcgatggcatcgacggtgaccgaggtccaaagggtccc ccgggtcccccgggtcccgctggagaaccgggcaagccaggagctccgggaaagccgggc acgccgggcgccgacggattaacaggacctgatggatcccctggttctgttggaccaaga ggacaaaaaggagaacctggtgttcctggatctcgcggatttccaggccgtggtattcct gggccccctggtcctcctggggcagcaggactccctggagagcttggccgtgttggacca gttggtgaccctgggagaagaggaccacctggcccccctggccccccgggacccagtgga acaattggctttcatgaaggagatccattgtgtcccaattcctgtccaccaggtcgctca ggatatccaggcttaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa cctggaagacaaggtcacaagggtgaagaaggtgaccagggggaacaaggagaagttgga gctcaaggacctccaggagctcaaggattacgaggcattatgggcatagttggggccaaa ggggaaaaaggtgctcggggcttagatggagaacctgggcctcaaggtcttcctggtgca cctggtgatcaaggacagcgaggacctccaggagaaataggtcccaagggagatagaggc cctcaaggttctagaggaattcctggcctccctgggaccaaaggtgacacgggcttgcca ggtgtggatggccgtgacggaatacctggaatgcccgggacaaagggtgaaccagggaag cctgggcctcctggtgatgcaggattgcagggcttacctggtgtacctgggattcctggt gtcaagggtgttgctggtgaaaagggcagtagaggagaaataggaccagtgggaccccca ggactaccaggtaaactgggttctcctggcagtcctggcctccctggcttgcctggcccc cctggccttcctggaatgaaaggtgacaggggagtagtcggtgagccaggtccaaagggt ggacagggttcatctggtgaagaaggtgaagcaggagaaaggggtgaacttggagagata ggattacctgggccaaagggatctgtgggtaaccctggggaacccggcttgagggggccc gaaggaagtcgggggcttcctggcgttgaaggaccaagaggaccccctggaccacgaggc gtgcagggagagcagggtgccaccggcctgcctggcatccagggccttccaggtagagca ccgacagatcagcacattaagcaggtttgcatgagagtcatgcaagagcatcttgctgag atggctgctagtctcaagcgaccggactcaggggcgtctggcctccctgggaggcctgga ccccctggtcccccgggaccacctggagagaatgggttcccaggccagatgggacttcgt ggcctcccaggcattaaaggcccccctggtgctcttggtttgagggggcctaaaggtgac ttgggagaaaggggggaacggggccctcctggaagaggtcctaagggcttgcctggagct acaggtctcccaggtgaaccaggtcctgccagctacgggaggaatggccgggatggcgag cgaggccccccaggggtggcaggaattcccggggtacctggtcccccgggccctcctggc cctcctgggttttgcgagccagcctcctgcaccctgcaggctgggcaacgggcatttagc aaagggcccgatcagtga

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