Leptonychotes weddellii (Weddell seal): 102728158
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Entry
102728158 CDS
T08708
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lww03400
]
102728158 (PMS1)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102728158 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
102728158
NCBI-ProteinID:
XP_006727021
UniProt:
A0A2U3X6D1
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAIDAPVMAIKYYTSKISSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDHFSTQ
YVLDGSGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYG
ILKPDLRIVFIHNKAVIWQKTRVSDHKMALMSVLGTGVMGNMEFFQYHSEESQIYLSGFL
PKHDADHSLTSLSTPERSFIFINSRPIHQKDILKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDINLTPDKSQVLLQNKESVLIALENLMTTCYGSLPSTNSYENNKTDVSSADMVV
SNTTETDVLFNKMESSGNNYPNVDSSAIPFQNDVHNDKSGKNTNYCLNHQVHVDDHYDNF
NSENSNIDKNTRNTFQQIPVNNLSCEDAQKECSETCFVSSVKQTQSENGNKNSRDESRKN
EEAAVPEKSLEICADDWSKGNTLKNSMGENIEPVKILVPQESSVCKLNNNAYPSPEQKNL
SEGSCNKKSNVVDNKSGQLTAYDLISNQVIKKPMSASALFVQDHRAQFLTENPKTNLEDT
TVQIEELWKTLSEEEKLKYEEKATKDLERYNRQIKRAIEKEPQISFKDGRKKIKPTSAWN
LAQKHKLKTSLANQPKVDELFQSQIEKKNQNIKIVQIPFSMENLKKNFEKHNIDLEEKEE
LCLLHNLKFPDAWLITSKREIMLLNPYRVEEALLFKRLIENHKLPAEPLEKPIILTENLF
NGSHYLEILCKMTTDDQRYSGSTYLSDPRLTANGFKIKWIPGASIAEDYLEIEEMANCLP
FYGVMDLKEILNSILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDVQDIIYR
MKDQFGNEIKGCVHGRPFFHHLTHLPETT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttacctgcagcaacagtgcgcctcctttcaagttctcaaataatcacttca
gtggtcagtgtggttaaagagctcattgaaaactccttggatgcaggtgccacaagcata
gatgttaaactggagaactatggatttgataaaattgaggtgcgagacaatggtgagggt
atcaaggccattgatgcacctgtaatggcaataaaatactatacttcaaaaataagtagt
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagccttgggatcaatt
tgttgtgtagctgaggttttaattactacaaggacagcttctgatcattttagcacccag
tatgttttagatggcagcggccacataatttctcaaaaaccttcacatcttggtcaaggt
acaactgtaactgctttaagattgtttaagaatctacctgtaagaaagcagttctactca
actgctaaaaaatgtaaagatgaaataaaaaaggtccaggatctcctcataagctatggt
atacttaaacctgacttaaggattgtttttatacataacaaggcagttatttggcagaaa
actagagtatctgatcataagatggctctcatgtctgttctggggactggcgttatgggc
aatatggaattctttcagtatcactctgaagagtctcagatttatctaagtggatttctt
ccaaagcatgatgcagaccactctttaacaagtctttcaaccccagaaaggagttttatc
tttataaacagtcgaccaatacatcaaaaagacatattaaagctaatccgacattattac
aatctgaagtgcctaaaggaatctactcgcttgtatcccattttctttctgaaaattgat
gttcctacagctgatgtggacataaatttaacaccagataaaagtcaagtgttattacag
aataaggaatctgttttaattgctcttgaaaatctgatgacgacttgttatggatcacta
cctagtacaaattcttacgaaaataataaaacagatgtttcctcagctgacatggttgtt
agtaatacaacagaaacagatgtgctttttaataagatggaatcatctggaaataattat
ccaaatgttgattcttcagccattcctttccaaaatgatgtgcataatgataaatctggg
aaaaacactaattattgtttaaatcatcaggtacatgttgatgaccattatgataatttt
aatagtgaaaattctaacattgataaaaacactagaaatacatttcaacagatcccagtg
aataatttatcatgtgaggatgcccagaaggaatgtagtgaaacttgttttgtaagttct
gttaagcagacccaatcagaaaatggcaataaaaacagtagagatgagagtaggaaaaat
gaggaagcagcagttcctgagaagtctttggaaatctgtgcagatgactggagcaaggga
aatacacttaaaaattcaatgggagaaaacattgaacctgtgaaaattttagtgcctcaa
gaaagttcagtatgtaaactcaataataatgcttatccaagccctgaacaaaagaatctc
agtgaaggttcctgtaacaaaaaatcaaatgtggtagataacaaatctggacagcttaca
gcgtatgatttaattagcaatcaggtaatcaagaaacccatgtcagcaagcgcccttttt
gttcaagatcatcgtgctcagtttctcacagaaaatcctaagaccaatttggaggataca
acagtacaaattgaagaactgtggaagacattgagtgaagaggaaaaactgaaatatgaa
gagaaggctactaaagatttggaacgatacaataggcaaatcaagagagccattgaaaag
gagccacaaatatcatttaaggatggcagaaaaaagataaagcccaccagtgcatggaat
ttggcacagaagcacaaattgaaaacttcattagctaatcagccaaaagttgatgagctc
tttcaatcccaaattgaaaaaaagaaccaaaacattaaaatagttcagatccccttttct
atggaaaacttaaaaaaaaattttgagaaacataacattgacttagaagagaaggaggaa
ctttgcttgcttcacaatctcaagtttcctgatgcgtggctaattacatccaaaagagag
ataatgttattaaatccttacagagtggaagaagccctgctatttaaaagacttattgag
aatcataaacttcctgcagagccactggaaaagcccattatattaacagagaatcttttt
aatggatctcattatttagagattttatgtaaaatgaccacagatgatcagagatatagt
ggatcaacttacctgtctgatcctcgtctcacagcaaatggtttcaagataaaatggata
ccaggtgcttccattgccgaagactacttggaaatagaagaaatggctaattgtctccca
ttctatggagtgatggacttaaaagaaattcttaattctatattaaacaaaaatgcaaag
gaagtttatgagtgtagacctcgcaaagtgataagttatttagagggagaagcagtgcgt
ctatctagacagttgcccatgtacttatccaaagaggacgtccaagacattatctacaga
atgaaggaccaatttggaaatgaaattaaagggtgtgttcatggtcgcccattttttcat
catttaacccatcttccagaaactacctga
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