Leptonychotes weddellii (Weddell seal): 102728477
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Entry
102728477 CDS
T08708
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lww03037
]
102728477 (IFT88)
Cilium and associated proteins [BR:
lww03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
102728477 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_10
TPR_17
ARM_TT21_4th
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
TPR_21
ARM_TT21_C
HEAT_Nup120
RPN7
HAT_PRP39_C
TPR_15
ARM_TT21_2nd
DUF6584
Motif
Other DBs
NCBI-GeneID:
102728477
NCBI-ProteinID:
XP_030890290
UniProt:
A0A7F8RA52
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MGRPMTGAIQDGITRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSAEEKI
RQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYS
VLFNLASQYSANEMYAEALNTYQVIVKNKMFINAGRLKVNMGNIYLKQRNYSKAIKFYRM
ALDQIPSVHKEMRIKIMQNIGVTFIKTGRYSDAINSFEHIMSMAPNLKAGFNLILSYFAV
GDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAIKNDHLRQMERERKAMAEK
YIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFNQAVET
LKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFAS
GDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEALDCFLKLHAILRNSAQVLYQ
IANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFP
SNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTY
KEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKMKEIREQRIKSGRDSSGGS
RSRREGSAGSDSGQNCSASSKGERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQIE
RPKTAAKKRIDEDDFADEELGDDLLPE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaccaatgacaggggctattcaggatggaattactagaccaatgacagcagtg
agagcagctggttttaccaaagcagctttgagaggctctgcatttgacccccttggtcag
tcaaggggccctgctcctcctttggaagccaaaaatgaagatagtgcagaagaaaagatt
agacaattagagaagaaagtaaatgaattggtagaagaaagctgtattgccaacagctgt
ggagacttaaaattggccttagaaaaggcaaaagatgcaggaagaaaagagagagtcttg
gtgagacaacgagaacaagttacaactccagaaaatatcaatttggatttaacttactca
gttcttttcaacttggctagtcagtattcggctaatgaaatgtatgctgaagcactaaac
acatatcaagttatagtgaaaaataagatgtttatcaatgcaggaagattgaaagtgaat
atgggaaatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatg
gcactagatcaaattccaagcgtccataaagaaatgaggattaaaatcatgcagaacatt
ggtgttacatttataaaaactggtcggtattcagatgccattaattcatttgagcacatc
atgagtatggccccaaatctgaaggcaggcttcaacctaattcttagttattttgctgtt
ggagatcgagacaaaatgaagaaggcattccaaaaattgattgctgttcccttagaaatt
gatgaagatgataaatatatttcaccaagtgatgatccacacaccaacttggtgattgaa
gctataaaaaatgatcatctaaggcaaatggaacgtgaaaggaaggccatggcagaaaaa
tacatcatgacagccgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggt
tatgactggtgtgttgaagttgtgaaagcgtctcaatatgtagagttagcaaatgatctg
gaaataaacaaggcaattacatacttgagacaaaaggactttaaccaagctgtagagacc
ttaaaaatgtttgaaaaaaaggacagtagagtgaaaagtgcagctgcaaccaacctctca
tttctttattatttggaaaatgaatttgcacaagccagcagctatgcagatttagctgtg
aactctgatagatataatccctcagctctgactaataaagggaatacagtttttgcaagt
ggtgattatgagaaggcagctgaattctataaagaggctctaagaaatgattcttcttgt
actgaagcactttataatattggccttacctataagaggctaaaccggctcgatgaagct
ttggattgtttcctgaaacttcacgcaatcctgagaaacagtgcccaagttctttaccag
atagcaaatgtatatgaattaatggaagatcccaatcaagctattgaatggttaatgcag
ctgatcagtgttgttccaactgattctagagctttgtctaaactaggagaattatatgat
agtgaaggagataaatcccaagcatttcaatattactatgagtcgtacaggtatttcccc
tctaacattgaagtcattgagtggcttggagcctattacattgacacccagttttgtgaa
aaagccattcaatactttgaaagagcttctcttatacagcctacacaagtgaaatggcag
ctgatggtagctagttgttttagaagaagtggtaactaccaaaaagcgttagatacttat
aaggagattcacagaaaatttccagaaaatgttgaatgtctgcgtttcttggttcgtctc
tgcacagatattggattaaaagaagttcaagaatatgcaacaaaactcaagagattggaa
aaaatgaaagaaataagggaacagcgcataaagtctggcagagacagcagtgggggctcc
cgcagcagaagagaggggagtgccggcagtgatagtggccagaactgtagtgccagtagt
aaaggtgaacgactaagtgccaaactcagagctttgcctgggacaaacgaaccttatgaa
agtagcagtaacaaagaaatagatgcctcctatgtggatccacttggccctcaaatagaa
agaccaaaaactgcagccaaaaaaagaatcgacgaggatgattttgctgatgaagaatta
ggagatgatttgcttcccgaataa
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