Leptonychotes weddellii (Weddell seal): 102728817
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Entry
102728817 CDS
T08708
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lww03009
]
102728817 (DDX52)
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102728817 (DDX52)
Ribosome biogenesis [BR:
lww03009
]
Eukaryotic type
90S particles
Helicases
102728817 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102728817
NCBI-ProteinID:
XP_030883300
UniProt:
A0A7F8QQ96
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MDAHDLFRRLGVGAKFDVRRFSADAARFQVGKRKHDFDSSEVLHGLDFFGNKKSVPGECG
ASRTHQELKDEEKKEESLTEKKREQSKKKRKMMMSEITSQEEGSTIQWISSVEAKIEDKK
IKRENKLTSGKLENLRKEKINFFRNKHKIHIQGTDLPDPIATFQQLDQEYKINSRLLQNI
LDAGFQIPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALII
SPTRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL
KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDV
EQWCKLNLDNVITVSIGARTTEPPRCPKRMGFNPPVLVFVQSIERAKELFHELIYEGINV
DVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHR
IGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKK
PLERESISTTPKYFLEKAKNKRKKVPGQNSKKKALEDKS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctctttcgccggcttggcgtgggggccaaattcgacgtgagacgt
ttttctgcggacgcggcgcgattccaggtaggaaaaaggaaacatgactttgattcttca
gaggtgctgcacggactggacttctttggaaacaagaagtctgtcccaggtgagtgtgga
gcatcacgaactcatcaggagcttaaagatgaagagaaaaaagaagagagcctaactgaa
aagaagagggaacagagcaagaaaaagaggaaaatgatgatgtcagaaattacttctcaa
gaagaaggttctactatacagtggatatcatctgtggaagcgaagattgaagataaaaaa
attaaaagagaaaataaactaacttcaggaaagttggagaatctcagaaaagaaaagata
aacttcttccggaataaacacaaaattcatatccaaggaactgatcttcctgacccaatt
gctacatttcagcaacttgaccaggaatataaaatcaattctcgactgcttcagaacatt
ctagacgcaggcttccagatacctacaccaatccaaatgcaagccattccagttatgctg
catggtcgagaacttctggcttctgctcctactggatctggaaagactttggcttttagc
attcccattttgatgcaactaaaacaacccacaaataaaggcttcagagctctgattata
tcaccaacacgagaacttgccaaccagattcacagagagttagtaaaaatctcggaggga
acaggattcaggatacacatgatccacaaagcggcagtggcagccaagaaatttggacct
aaatcatctaagaagtttgatattcttgtgactactccaaatcgactaatctatttatta
aagcaagatcctccaggaatagatttaacaagtgttgagtggctggtagtagatgaatca
gacaaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcctg
gcctgcacatctcctaaggtcagaagagctatgttcagtgcaacttttgcatatgatgtt
gagcagtggtgcaaactcaacctggacaatgtcattactgtatccattggagcaaggacg
actgagccacccaggtgccccaagagaatgggtttcaatccacctgttcttgtttttgtt
cagtccattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgta
gatgttattcatgcagacagaacacagcaacagagagataacacagtccacagcttccga
gctggaaaaatctgggttcttatttgtacagccttgctggcccgagggattgattttaaa
ggtgtgaacttggtgatcaactatgacttcccaaccagttcagtggaatacatccacagg
ataggtcgaactggaagagcggggcataaaggaaaagctgttacatttttcactgaagat
gataaaccattattaagaagcgttgccaatgttatacagcaggccggatgtcctgtgcca
gaatacataaaaggtttccaaaaactactaagcaaacaaaagaaaaagatgattaagaag
ccattggaaagggagagcattagtacaactccaaaatatttcttagaaaaagctaagaat
aaacggaaaaaggtccctggtcagaacagcaagaagaaagctcttgaagacaaaagttaa
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