Leptonychotes weddellii (Weddell seal): 102728910
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Entry
102728910 CDS
T08708
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04151
PI3K-Akt signaling pathway
lww04382
Cornified envelope formation
lww04510
Focal adhesion
lww04512
ECM-receptor interaction
lww04820
Cytoskeleton in muscle cells
lww04926
Relaxin signaling pathway
lww04933
AGE-RAGE signaling pathway in diabetic complications
lww04974
Protein digestion and absorption
lww05146
Amoebiasis
lww05165
Human papillomavirus infection
lww05200
Pathways in cancer
lww05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102728910
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102728910
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102728910
09142 Cell motility
04820 Cytoskeleton in muscle cells
102728910
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102728910
09154 Digestive system
04974 Protein digestion and absorption
102728910
09158 Development and regeneration
04382 Cornified envelope formation
102728910
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102728910
09162 Cancer: specific types
05222 Small cell lung cancer
102728910
09172 Infectious disease: viral
05165 Human papillomavirus infection
102728910
09174 Infectious disease: parasitic
05146 Amoebiasis
102728910
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102728910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lww04147
]
102728910
00536 Glycosaminoglycan binding proteins [BR:
lww00536
]
102728910
Exosome [BR:
lww04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102728910
Glycosaminoglycan binding proteins [BR:
lww00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102728910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102728910
NCBI-ProteinID:
XP_030878476
UniProt:
A0A7F8QCW0
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MTHRFSALKCEPVQVRSIQGQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGP
KGDVGARGVSGFPGADGIPGHPGQGGPRGPPGYDGCNGTRGDVGRQGLVGPDGFLGPPGP
QGPKGQKGEPYALSSVDRDRYRGEPGDPGLVGFQGPPGRPGPIGQMGPVGAPGRPGPPGP
PGPKGQPGNRGLGFYGEKGEKGDMGLPGPNGIPSDTHHAIIGPMKEMFHPDQYKGEKGSD
GEPGVKGISLKGEEGVMGFSGPRGAAGFDGEKGSPGQKVSRMHETQSAPGLTHLTKVKHY
EDCAIPGKETVPQKNTFKTLHKSSFLPDHSQCPSQTTHLFAHLCKLACWFCPLAAAPASR
GTTLGKVADVAAECLPAFFICSPVLSGGPVSVAGARGDPGFPGTHGEPGSRGAPGDPGPP
GLPGTSVRDEDGRRGLPGEMGPKGFIGDPGIPALYPGPPGTDGRPGLPGPPGPAGPPGPD
GFLFGLKGAEGNVGYPGPSGFPGARGHKGWKGDAGDCKCAESDQFIGGLPGLPGPKGFPG
VSGEPGKKGSQGDPGQHGIPGFPGFKGTPGNVGPPGPKGVKGDSRAVTTKGERGQPGVPG
VPGLKGDDGVPGRDGLDGFPGLPGAPGDGIKGPPGDSGYPGVPGTKGVPGERGSPGLGLP
GPKGERGFPGDAGLPGPPGFPGPPGPPGTPAQIDCDTGVKRPIGGDGQEAVQPDCVGGPK
GSPGLPGPPGPTGAKGLQGIPGLSGADGAPGLRGFPGDPGREGFPGPPGFVGPRGSKGAA
GLPGADGLPGPTGLPGPIGPPGDRGLPGEVLGAQPGPRGDAGLPGQPGLKGPPGERGPPG
FRGSQGMPGMPGLKGQPGFLGPSGQPGLPGPPGQHGFPGAPGREGPLGLPGAPGHGGLPG
DRGDPGDTGVPGPVGMKGLFGDRGDPGLLGERGPPGSPGFKGMSGMPGIPGQKGGRGSPG
MDGFQGMVGLKGRPGLPGNKGEDGFFGIPGLKGLAGEPGVKGSRGDPGPPGPPPIILPGM
KDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLSGVPGLPGKPGHIKGVKGDIGVPGVPG
SPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGLYGEVGPTGDFGDIGDTIDLPGSPGLK
GERGVTGTPGLKGFFGEKGTVGEVGFPGITGVPGVQGPPGPKGQTGFPGLTGLQGPQGEP
GRVGLPGDKGDHGWPGIPGSPGFPGIRGISGLHGLPGTKGFPGSPGADIHGDPGFPGPAG
DRGDPGEPNTRPGPFGAPGQKGERGDPGEAKHRPVAPPAQPDPVCL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcgtttctctgctttaaaatgtgaacccgtccaagtcagatcaattcagggc
cagcccgggccagtgggcccccaggggtacaccgggcccccaggcctgcagggattccca
ggactacagggccgcaaaggtgacaagggcgagcgggggtcacccgggatcacaggaccg
aaaggagacgtgggagcgagaggtgtttctggattccctggtgccgacggaattcccgga
caccccgggcaaggtgggcccagaggaccgcccggctatgacggctgcaacggaaccaga
ggagacgtgggccggcagggactcgtcggccccgatgggttcctcggccctcctgggccc
caaggacccaaaggacagaaaggcgagccttatgcgctatccagtgtggaccgcgacaga
tacaggggtgaacccggagaccctggcttggttggtttccagggaccccctggccgtcct
gggcctataggacagatgggtccggttggagctccaggaagaccaggcccgcctggaccc
cctggaccaaaaggacagccaggcaacagaggacttggcttttatggagaaaagggtgaa
aagggcgacatgggactgccgggacccaatgggattccatcggacacccaccatgccatc
atcggacccatgaaggaaatgttccacccagatcaatataagggtgaaaaggggagtgat
ggggagccgggagtaaaaggcatatccttgaagggagaagaaggagtcatgggtttttca
ggcccacggggtgctgctggcttcgatggtgagaaaggttctccgggacaaaaagtaagt
cggatgcacgaaacacaatctgccccggggctgacacatcttacaaaggtcaaacattat
gaagactgtgctatcccagggaaagaaactgtgccccagaaaaacacatttaaaaccctg
cataaatcatccttcctcccagatcattcgcaatgcccgagtcagaccactcaccttttt
gctcacctttgcaaactggcgtgttggttctgtcctttggcagcggcccctgcgtcacgg
ggcaccactcttgggaaagttgccgatgtggcggccgagtgtctacctgcatttttcata
tgcagtcctgttctaagtggggggcctgtctcggttgcaggtgccagaggtgacccagga
ttcccagggacccacggggagcccggaagccgaggtgcaccaggagacccgggcccaccc
ggcctccccggcacgtccgtcagagatgaagatgggaggagaggcttaccgggtgaaatg
ggccccaaaggcttcataggagacccaggcatccctgcgctgtaccccggcccaccgggc
accgatggaaggccaggactcccaggacccccagggcctgccggaccaccgggaccagat
ggtttccttttcggccttaaaggagcagaagggaacgtgggctaccctgggccttctggc
ttccctggggctcgcggacacaaaggatggaaaggtgacgctggggactgtaagtgcgca
gagagtgatcagttcatcggggggctcccggggctgccaggccccaagggctttcccggc
gtcagtggggagccagggaagaaagggagccaaggagaccccggccagcacggcatccct
gggttccccgggttcaagggcacccctggcaacgttggacctcccgggcccaaaggggtg
aagggggattccagagcggtcaccaccaaaggtgagaggggacagccaggggtcccaggt
gtgccggggctgaaaggtgacgacggtgtcccgggccgcgacgggctggatggcttccca
ggcctcccgggagctccgggtgatggcatcaaaggccccccaggggactcaggttaccca
ggagtacctggcactaagggcgttccaggagaaagaggctccccgggactgggcctgccc
ggccccaaaggcgagcgtggtttccccggagatgccggattacctggaccaccaggcttt
cccggtccccccggccccccaggcactcccgcacaaatagactgtgacacaggtgtgaaa
aggcccatcggaggtgacggacaggaggccgtgcagccagattgtgtcggagggcccaag
ggatcgccaggcctgccgggacccccaggccccacaggtgccaagggcctccaagggata
ccaggactctcgggagctgacggagcaccagggctcaggggtttccctggagacccaggt
cgtgaaggattcccaggacccccagggttcgtggggccccgaggatccaaaggtgcagca
ggccttcctggtgcggatggactcccgggtcccactggtctgccaggccccattgggccc
ccaggggacaggggccttcccggagaagttctgggagcccagcccgggccccggggtgat
gctggactgcccggacagcccgggctgaaaggccctccaggagagagaggcccacctgga
ttcaggggaagccagggcatgccgggaatgccgggcctgaagggccagccgggcttccta
ggaccctcgggccagccaggcctgcccgggccgccgggacagcacggcttcccaggagct
cccggccgggaggggcccttggggctgccaggcgcccccggtcacggaggtctgcctgga
gacagaggggacccaggggacacaggtgtccctggccctgtgggcatgaagggtctcttt
ggcgatagaggtgatcctggtttgctgggggagagaggccccccaggaagtcctgggttt
aaaggaatgagcggaatgcctggtatccccggacagaaaggcgggagaggttcacccggg
atggatggtttccaaggcatggtcgggctcaaaggaagacccgggcttccgggaaacaaa
ggagaagacggattttttggaattccaggactgaagggtctggctggggagccaggtgtg
aaaggcagccgcggggaccccgggcccccaggaccacctcccatcatcctgccaggaatg
aaagacatcaaaggagagaaaggagatgaagggcctatggggttgaaaggatacctgggc
ctaaaaggtgttccaggaatgccagggatccccgggctgtcgggagtccccgggttgccg
gggaagccgggccacatcaaaggagtcaaaggagacatcggcgttcccggcgtgcctggt
tcaccaggattccccggcgtgcccggcccccccggaatcatagggtttcccgggttcaca
ggaagtaggggtgacaagggagctccgggcagagcaggcctgtacggcgaggttggcccc
acgggtgacttcggtgatatcggagacaccatagacctgccgggaagcccgggcctgaag
ggggagcggggcgtcacggggacaccaggtctaaagggattctttggggaaaaaggaacg
gtgggcgaagttggcttccccgggataacaggcgtgccaggcgtccagggcccccccgga
cccaaagggcaaacaggcttcccaggattgacagggctgcaggggccgcagggagagccg
gggcgagtgggattgcccggtgacaaaggagaccacggctggccagggattccaggctcg
ccaggttttcccggcatccgaggcatcagcggactgcacggcctgccaggcaccaaaggc
tttccgggatccccaggtgcggacatccacggagaccccggcttccccggtcctgctggg
gaccggggtgacccaggagagcccaacacccgcccaggcccttttggagccccaggacag
aaaggggagcgaggagatccaggtgaggccaagcaccgcccagtggcaccacctgcacaa
ccagacccagtgtgtctgtga
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