KEGG   Leptonychotes weddellii (Weddell seal): 102728910
Entry
102728910         CDS       T08708                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww04151  PI3K-Akt signaling pathway
lww04382  Cornified envelope formation
lww04510  Focal adhesion
lww04512  ECM-receptor interaction
lww04820  Cytoskeleton in muscle cells
lww04926  Relaxin signaling pathway
lww04933  AGE-RAGE signaling pathway in diabetic complications
lww04974  Protein digestion and absorption
lww05146  Amoebiasis
lww05165  Human papillomavirus infection
lww05200  Pathways in cancer
lww05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:lww00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102728910
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102728910
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102728910
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102728910
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    102728910
  09154 Digestive system
   04974 Protein digestion and absorption
    102728910
  09158 Development and regeneration
   04382 Cornified envelope formation
    102728910
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102728910
  09162 Cancer: specific types
   05222 Small cell lung cancer
    102728910
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102728910
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    102728910
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    102728910
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lww04147]
    102728910
   00536 Glycosaminoglycan binding proteins [BR:lww00536]
    102728910
Exosome [BR:lww04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102728910
Glycosaminoglycan binding proteins [BR:lww00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102728910
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102728910
NCBI-ProteinID: XP_030878476
UniProt: A0A7F8QCW0
LinkDB
Position
Unknown
AA seq 1306 aa
MTHRFSALKCEPVQVRSIQGQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGP
KGDVGARGVSGFPGADGIPGHPGQGGPRGPPGYDGCNGTRGDVGRQGLVGPDGFLGPPGP
QGPKGQKGEPYALSSVDRDRYRGEPGDPGLVGFQGPPGRPGPIGQMGPVGAPGRPGPPGP
PGPKGQPGNRGLGFYGEKGEKGDMGLPGPNGIPSDTHHAIIGPMKEMFHPDQYKGEKGSD
GEPGVKGISLKGEEGVMGFSGPRGAAGFDGEKGSPGQKVSRMHETQSAPGLTHLTKVKHY
EDCAIPGKETVPQKNTFKTLHKSSFLPDHSQCPSQTTHLFAHLCKLACWFCPLAAAPASR
GTTLGKVADVAAECLPAFFICSPVLSGGPVSVAGARGDPGFPGTHGEPGSRGAPGDPGPP
GLPGTSVRDEDGRRGLPGEMGPKGFIGDPGIPALYPGPPGTDGRPGLPGPPGPAGPPGPD
GFLFGLKGAEGNVGYPGPSGFPGARGHKGWKGDAGDCKCAESDQFIGGLPGLPGPKGFPG
VSGEPGKKGSQGDPGQHGIPGFPGFKGTPGNVGPPGPKGVKGDSRAVTTKGERGQPGVPG
VPGLKGDDGVPGRDGLDGFPGLPGAPGDGIKGPPGDSGYPGVPGTKGVPGERGSPGLGLP
GPKGERGFPGDAGLPGPPGFPGPPGPPGTPAQIDCDTGVKRPIGGDGQEAVQPDCVGGPK
GSPGLPGPPGPTGAKGLQGIPGLSGADGAPGLRGFPGDPGREGFPGPPGFVGPRGSKGAA
GLPGADGLPGPTGLPGPIGPPGDRGLPGEVLGAQPGPRGDAGLPGQPGLKGPPGERGPPG
FRGSQGMPGMPGLKGQPGFLGPSGQPGLPGPPGQHGFPGAPGREGPLGLPGAPGHGGLPG
DRGDPGDTGVPGPVGMKGLFGDRGDPGLLGERGPPGSPGFKGMSGMPGIPGQKGGRGSPG
MDGFQGMVGLKGRPGLPGNKGEDGFFGIPGLKGLAGEPGVKGSRGDPGPPGPPPIILPGM
KDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLSGVPGLPGKPGHIKGVKGDIGVPGVPG
SPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGLYGEVGPTGDFGDIGDTIDLPGSPGLK
GERGVTGTPGLKGFFGEKGTVGEVGFPGITGVPGVQGPPGPKGQTGFPGLTGLQGPQGEP
GRVGLPGDKGDHGWPGIPGSPGFPGIRGISGLHGLPGTKGFPGSPGADIHGDPGFPGPAG
DRGDPGEPNTRPGPFGAPGQKGERGDPGEAKHRPVAPPAQPDPVCL
NT seq 3921 nt   +upstreamnt  +downstreamnt
atgacccatcgtttctctgctttaaaatgtgaacccgtccaagtcagatcaattcagggc
cagcccgggccagtgggcccccaggggtacaccgggcccccaggcctgcagggattccca
ggactacagggccgcaaaggtgacaagggcgagcgggggtcacccgggatcacaggaccg
aaaggagacgtgggagcgagaggtgtttctggattccctggtgccgacggaattcccgga
caccccgggcaaggtgggcccagaggaccgcccggctatgacggctgcaacggaaccaga
ggagacgtgggccggcagggactcgtcggccccgatgggttcctcggccctcctgggccc
caaggacccaaaggacagaaaggcgagccttatgcgctatccagtgtggaccgcgacaga
tacaggggtgaacccggagaccctggcttggttggtttccagggaccccctggccgtcct
gggcctataggacagatgggtccggttggagctccaggaagaccaggcccgcctggaccc
cctggaccaaaaggacagccaggcaacagaggacttggcttttatggagaaaagggtgaa
aagggcgacatgggactgccgggacccaatgggattccatcggacacccaccatgccatc
atcggacccatgaaggaaatgttccacccagatcaatataagggtgaaaaggggagtgat
ggggagccgggagtaaaaggcatatccttgaagggagaagaaggagtcatgggtttttca
ggcccacggggtgctgctggcttcgatggtgagaaaggttctccgggacaaaaagtaagt
cggatgcacgaaacacaatctgccccggggctgacacatcttacaaaggtcaaacattat
gaagactgtgctatcccagggaaagaaactgtgccccagaaaaacacatttaaaaccctg
cataaatcatccttcctcccagatcattcgcaatgcccgagtcagaccactcaccttttt
gctcacctttgcaaactggcgtgttggttctgtcctttggcagcggcccctgcgtcacgg
ggcaccactcttgggaaagttgccgatgtggcggccgagtgtctacctgcatttttcata
tgcagtcctgttctaagtggggggcctgtctcggttgcaggtgccagaggtgacccagga
ttcccagggacccacggggagcccggaagccgaggtgcaccaggagacccgggcccaccc
ggcctccccggcacgtccgtcagagatgaagatgggaggagaggcttaccgggtgaaatg
ggccccaaaggcttcataggagacccaggcatccctgcgctgtaccccggcccaccgggc
accgatggaaggccaggactcccaggacccccagggcctgccggaccaccgggaccagat
ggtttccttttcggccttaaaggagcagaagggaacgtgggctaccctgggccttctggc
ttccctggggctcgcggacacaaaggatggaaaggtgacgctggggactgtaagtgcgca
gagagtgatcagttcatcggggggctcccggggctgccaggccccaagggctttcccggc
gtcagtggggagccagggaagaaagggagccaaggagaccccggccagcacggcatccct
gggttccccgggttcaagggcacccctggcaacgttggacctcccgggcccaaaggggtg
aagggggattccagagcggtcaccaccaaaggtgagaggggacagccaggggtcccaggt
gtgccggggctgaaaggtgacgacggtgtcccgggccgcgacgggctggatggcttccca
ggcctcccgggagctccgggtgatggcatcaaaggccccccaggggactcaggttaccca
ggagtacctggcactaagggcgttccaggagaaagaggctccccgggactgggcctgccc
ggccccaaaggcgagcgtggtttccccggagatgccggattacctggaccaccaggcttt
cccggtccccccggccccccaggcactcccgcacaaatagactgtgacacaggtgtgaaa
aggcccatcggaggtgacggacaggaggccgtgcagccagattgtgtcggagggcccaag
ggatcgccaggcctgccgggacccccaggccccacaggtgccaagggcctccaagggata
ccaggactctcgggagctgacggagcaccagggctcaggggtttccctggagacccaggt
cgtgaaggattcccaggacccccagggttcgtggggccccgaggatccaaaggtgcagca
ggccttcctggtgcggatggactcccgggtcccactggtctgccaggccccattgggccc
ccaggggacaggggccttcccggagaagttctgggagcccagcccgggccccggggtgat
gctggactgcccggacagcccgggctgaaaggccctccaggagagagaggcccacctgga
ttcaggggaagccagggcatgccgggaatgccgggcctgaagggccagccgggcttccta
ggaccctcgggccagccaggcctgcccgggccgccgggacagcacggcttcccaggagct
cccggccgggaggggcccttggggctgccaggcgcccccggtcacggaggtctgcctgga
gacagaggggacccaggggacacaggtgtccctggccctgtgggcatgaagggtctcttt
ggcgatagaggtgatcctggtttgctgggggagagaggccccccaggaagtcctgggttt
aaaggaatgagcggaatgcctggtatccccggacagaaaggcgggagaggttcacccggg
atggatggtttccaaggcatggtcgggctcaaaggaagacccgggcttccgggaaacaaa
ggagaagacggattttttggaattccaggactgaagggtctggctggggagccaggtgtg
aaaggcagccgcggggaccccgggcccccaggaccacctcccatcatcctgccaggaatg
aaagacatcaaaggagagaaaggagatgaagggcctatggggttgaaaggatacctgggc
ctaaaaggtgttccaggaatgccagggatccccgggctgtcgggagtccccgggttgccg
gggaagccgggccacatcaaaggagtcaaaggagacatcggcgttcccggcgtgcctggt
tcaccaggattccccggcgtgcccggcccccccggaatcatagggtttcccgggttcaca
ggaagtaggggtgacaagggagctccgggcagagcaggcctgtacggcgaggttggcccc
acgggtgacttcggtgatatcggagacaccatagacctgccgggaagcccgggcctgaag
ggggagcggggcgtcacggggacaccaggtctaaagggattctttggggaaaaaggaacg
gtgggcgaagttggcttccccgggataacaggcgtgccaggcgtccagggcccccccgga
cccaaagggcaaacaggcttcccaggattgacagggctgcaggggccgcagggagagccg
gggcgagtgggattgcccggtgacaaaggagaccacggctggccagggattccaggctcg
ccaggttttcccggcatccgaggcatcagcggactgcacggcctgccaggcaccaaaggc
tttccgggatccccaggtgcggacatccacggagaccccggcttccccggtcctgctggg
gaccggggtgacccaggagagcccaacacccgcccaggcccttttggagccccaggacag
aaaggggagcgaggagatccaggtgaggccaagcaccgcccagtggcaccacctgcacaa
ccagacccagtgtgtctgtga

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