Leptonychotes weddellii (Weddell seal): 102729135
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Entry
102729135 CDS
T08708
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lww04121
]
102729135 (PDZRN4)
Enzymes [BR:
lww01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102729135 (PDZRN4)
Ubiquitin system [BR:
lww04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102729135 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102729135
NCBI-ProteinID:
XP_006735300
UniProt:
A0A2U3XV17
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MALTINGEDVQNREEAVALLSSDECKRIVLLVARPEIQLDEGWLEDERNEFLEELNLEML
EEQHNEAMQCTANEAEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQE
NAAEDPNSTSLKSTRELGQSQDTLGSVELQCNESFMSGEYIDSDCIGNPDEECERFRQLL
ELKCKFRNPGEYDLYYSSSTIECHQGEQEGVEHELQLLNEELRNIELECQNIMQAHRLQK
VTDQYGDIWALHDGGFRNYNTSMDMPRGKLDDIIEHPEKSDKDSSSAYNTAESCRSTPLT
VDRSPDSSLPRVINLTNKKNLRSTMAANQSSSGQSSKESTSTKAKTMEQDCSVEGKEKIS
ESNKLSDQEKTSNEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLS
LVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILRERALKIKEERSGMTTDDDT
MSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELS
HKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctcttacaataaatggggaagatgtccagaatcgagaagaagcagtggcgttgctg
tctagtgatgagtgcaagagaatcgtgctgcttgtcgcaaggcccgagattcagctggat
gaaggctggttggaagatgaaaggaatgaattcttagaggagttaaacttggagatgctg
gaagaacagcataatgaagcgatgcagtgcacggccaatgaggcggagcagccaaaaaaa
caagaagaagaagaaggcacaacagacacagcaacatcatcctccaacaaccatgagaag
gacagtggggtggggcgcacagatgaaagcttgcggaatgatgagagctcagagcaggag
aatgcagctgaggatcccaacagcacatctttgaagagcacgagagagctggggcagagc
caagacactctaggaagcgttgaacttcagtgcaatgagagcttcatgtctggcgaatac
atcgactccgactgcattggcaacccagatgaggagtgtgaaagattccgacagctcttg
gagctcaaatgcaagtttcgaaaccctggagagtatgacctgtattactcgagcagcaca
atagaatgccatcagggggaacaagagggtgtggagcacgagctacagttgcttaatgaa
gaactaagaaacattgaactggagtgccaaaatatcatgcaggctcacaggctccagaag
gtgacagaccagtatggagacatctgggctttgcacgatggaggattccggaattataac
accagcatggatatgccacggggaaaactagatgacatcatcgaacacccagagaagtca
gacaaggacagttctagtgcttacaacacagcagaaagctgcagaagcaccccactcact
gtggaccgttcccctgacagctcccttccaagagtgatcaacctcaccaataagaaaaac
ctgagaagcacaatggccgccaatcagtcttcttccggacagagcagtaaagagtcgacc
tccaccaaagccaaaaccatggaacaggactgcagcgtggagggcaaggagaagatttca
gaaagcaacaagctttctgatcaggagaaaaccagcaatgaacacatcccttacctctct
ccttaccacagctcctcatatagatatgcaaacatcccagcgcatgcccgccattatcaa
agctacatgcagttaattcaacagaaatctgcagttgagtatgctcagagccagctgagt
ttagtgagcatgtgcaaggagtctcagaagtgttcagagcccaagatggaatggaaggtg
aaaatcaggagcgacgggacacggtacataacaaagagaccagtgcgagaccggattctg
agggaacgtgccttaaagatcaaggaggagcgcagtggcatgacgacagatgatgacacc
atgagcgagatgaaaatgggccgctactggagcaaagaggagagaaagcagcacctggtt
cgggccaaagagcagcgtaggcgccgagagtttatgatgcggagccgcttggagtgtctt
aaggagagcccccagagtggcagcgagggcaagaaggagatcaacatcattgaactgagt
cacaaaaagatgatgaaaaaaagaaacaagaaaattttggacaactggatgacaatccaa
gaactgatgacccacggggccaaatctcctgatggcacacgagttcataatgccttcttg
tcagtcaccactgtatga
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