Leptonychotes weddellii (Weddell seal): 102729343
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Entry
102729343 CDS
T08708
Symbol
SCN3A
Name
(RefSeq) sodium channel protein type 3 subunit alpha
KO
K04836
voltage-gated sodium channel type III alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102729343 (SCN3A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lww04040
]
102729343 (SCN3A)
Ion channels [BR:
lww04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102729343 (SCN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
102729343
NCBI-ProteinID:
XP_030886594
UniProt:
A0A7F8QZS6
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MAQALLVPPGPDSFRLFTRESLAAIEKRAAEEKAKKPKREQDNDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPQCPEGYICVKAGRNPNYGYTSFDTFSWAFLSLFRLMTQ
DYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATLEEAEQKE
AEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGELLESSSEASKLSSKSAKEWRNR
RKKRRQREHLEGNNKGEGDRFPKSESEDSVKRRSFLFSMDGNRLNSDKKFYSPHQSLLSI
RGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHSTFEDSESRRDSLFVPHRHGERRN
SNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLGTTTETEVRKRRLSSYQISMEMLEDS
SGRQRAMSIASILTNTMEELEESRQKCPPCWYRFANVFLIWDCCDAWLKVKHLVNLIVMD
PFVDLAITICIVLNTLFMAMEHYPMTGQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYY
FQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISSDCQLPRWHMNDFFHSFLIVFRV
LCGEWIETMWDCMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDN
EMNNLQIAVGRMQKGIDYVKNKIRECFRKTFFRKPKVIEIHEGNKIDSCISNNTGIEISK
ELNYLKDGNGTTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEE
FSSESELEESKEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPF
CQVSIEEGKGKVWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTM
LEYADKVFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGA
IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAG
KFYHCVNTTTGNMFEVSEVNNLSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGW
MDIMYAAVDSRDVKLQPVYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLN
MVTMMVETDDQSKYMTLVLSRINLVFIILFTGEFVLKLISLRYYYFTIGWNIFDFVVVIL
SIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPIL
NSAPPDCDPDTIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATE
ESAEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDL
PMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQ
EEVSAAIIQRNFRCYLLRQRLKKVSSEYNKEAIKGRIDLPIKEDMIIDKLNGNSTPEKTD
GSSSTTSPPSYDSVTKPDKEKFEKDKPEKESKGKEVRENQK
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtacccccggggcctgacagcttccgcctttttactagagaa
tctcttgctgctatcgaaaaacgtgctgcagaagagaaagccaaaaagcccaagagagaa
caagacaatgatgacgagaacaaaccaaagccaaatagtgacttggaagctgggaagaac
cttccatttatttacggagacatccctccagagatggtgtcggagcccttggaggacctg
gacccccagtgtccagaaggatacatctgtgtgaaggctggccgaaaccccaactatgga
tacacaagctttgatacctttagttgggctttcttgtctctatttcgactcatgactcaa
gactactgggagaacctttaccagttgacattacgtgctgctggaaaaacatacatgata
ttttttgtcctggtgattttcttgggatctttctatttggtgaatttgatcctggctgtg
gtggccatggcctatgaggaacagaatcaggccaccttggaagaggcagaacagaaagag
gctgaatttcagcaaatgctggaacagcttaaaaagcaacaggaagaagctcaggcagtt
gcagcagcatcagctgcttcaagagatttcagtggaataggtgggttaggagagctcctg
gaaagttcttcagaagcatcaaagttaagttctaaaagcgctaaggagtggaggaaccga
aggaagaaaagaagacaaagggagcatcttgaaggaaacaacaaaggagagggagacagg
tttcccaaatctgaatctgaggacagtgtcaaaagaagaagcttccttttctccatggat
ggaaacagactgaatagtgacaagaaattctactcccctcatcagtctctgttaagtatc
cgtggctccctgttttccccacgacgcaatagcaaaacaagcattttcagcttcagaggt
cgagcaaaggacgtcggttctgaaaatgactttgctgatgatgagcacagtacatttgaa
gacagcgagagcaggagagactcattgtttgtgccgcacagacacggagagcgacgcaac
agtaacgttagtcaggccagtatgtcatccaggatggtgccagggcttccagcaaatggg
aagatgcacagcactgtggattgcaatggtgtggtttccttgggcaccaccactgaaacg
gaagtcagaaagagaaggctaagttcttaccagatttcaatggagatgctggaggattcc
tctggacggcaaagagccatgagcatagctagcatcctgaccaacacaatggaggaactt
gaagaatctagacagaaatgtccaccatgctggtacagatttgccaatgtgtttttgatc
tgggactgctgtgatgcatggttaaaagtaaagcatcttgtgaatttaattgttatggat
ccatttgttgatcttgccatcactatctgcattgtcttaaataccctctttatggccatg
gagcactacccaatgactggccaattcagtagtgtactgactgtaggaaacttggtcttc
actgggatcttcacagcagaaatggttctcaagatcattgccatggatccatattattat
ttccaagaaggctggaatatatttgatggaattattgtcagccttagtttgatggagctt
ggcctggcaaatgtggagggattgtctgtactgagatcattcagactgcttcgagttttc
aagttggcaaaatcctggcccacactgaatatgctgataaagatcattggcaattctgtg
ggggctttaggtaacctcaccttggtgttggccatcattgtcttcatttttgctgtggtc
ggcatgcagctatttggtaagagctacaaagaatgtgtctgcaagatctccagtgactgc
caactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttccgcgtg
ctgtgtggagagtggatagagaccatgtgggactgtatggaggtcgctggccaaaccatg
tgccttattgttttcatgttggtcatggtcattggaaaccttgtggttctgaacctcttt
ctggccttattgttgagctcatttagctcagacaatcttgctgctacagatgatgataat
gaaatgaacaatctccagattgcagtaggaaggatgcaaaagggaattgattatgtgaaa
aataagatacgggagtgtttcagaaaaaccttttttagaaagccaaaagttatagagatc
catgaaggcaacaaaatagacagctgcatatccaataatactggaatagaaataagcaaa
gaacttaattatcttaaagatgggaatggaaccaccagtggtgtaggtaccggaagcagt
gttgaaaaatatgtaatcgatgaaaatgattatatgtcattcataaacaaccccagcctc
actgtaacagtgccaattgctgttggagagtctgactttgaaaacttaaatactgaagag
tttagcagtgagtcagaactagaagaaagcaaagagaaattaaatgcaaccagctcatct
gaaggaagcacagttgatgttgctccaccccgagaaggtgaacaagctgaaattgaacct
gaggaagaccttaaaccggaagcttgctttactgaaggatgtattaaaaagtttccattc
tgtcaagtaagtatagaagagggcaaaggaaaggtctggtggaatcttcggaaaacctgc
tacagcattgttgaacacaactggtttgagactttcattgtcttcatgattcttctcagc
agtggtgctttggcttttgaagatatatacattgaacagcgaaagactatcaaaaccatg
ctagaatatgctgacaaggtcttcacttacatattcattctggaaatgctcctcaaatgg
gtagcttatggatttcaaacatatttcaccaatgcctggtgctggctagatttcttgatt
gtcgatgtttctttggttagcttggtagccaatgctctcggctactcagaacttggtgcc
attaaatccctacggacattaagagctttaagacctctaagagctttatcccggtttgaa
ggcatgagggttgttgtgaatgctcttgttggagcaattccctctatcatgaatgtactc
ttggtgtgtctcatcttctggctgatctttagcatcatgggtgtgaatttgtttgctggc
aagttctaccactgtgttaacacgacaacgggtaacatgtttgaagttagtgaagtcaac
aatctgagcgactgtcaggctcttggcaagcaagctagatggaaaaacgtcaaagtaaac
tttgataatgttggcgctggctatcttgcattgcttcaagtggccacattcaaaggctgg
atggatattatgtatgcagctgttgattcacgagatgtaaaacttcagcctgtatatgaa
gaaaatctatatatgtatttatacttcgtcatctttatcatctttgggtcattcttcact
ctgaatctattcattggtgtaatcatagataacttcaaccaacagaaaaagaagtttgga
ggtcaagacatctttatgacagaggaacagaaaaaatactataatgcaatgaagaaactt
ggatccaagaaacctcagaagcccatacctcggccagcaaacaaattccaaggaatggtc
tttgattttgtaaccagacaagtctttgatatcagcatcatgatcctcatctgcctcaac
atggtcaccatgatggtggaaactgatgaccagagcaaatatatgactctagttttgtcc
cggatcaaccttgtgttcattatcctgttcactggagaatttgtgctaaagctcatttct
ctcagatactactacttcaccatcggctggaacatatttgattttgtggttgtgattctc
tccattgtaggcatgtttctggctgagctgatagaaaaatactttgtgtcccctaccctg
ttccgagtgatccggctcgccaggattggtcgaatcttgcgtctgatcaaaggggccaag
gggatccgcacgctgctctttgccctgatgatgtcccttcctgccttgtttaacatcggc
ctcctgctcttcttggtcatgttcatctatgccatctttggaatgtccaactttgcctat
gttaaaaaggaagctggaattgatgacatgttcaactttgagaccttcggcaacagcatg
atctgcttgttccaaattaccacctctgctggctgggatggattgctagcacctattctc
aacagtgcaccacctgactgtgatcctgacacaattcaccctggaagttcagttaaggga
gactgcgggaacccgtctgtcgggattttcttttttgtcagttacattatcatatcattt
ctggttgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgttgctactgaa
gaaagtgcagagcccctgagtgaggatgactttgagatgttctatgaggtttgggaaaag
tttgatcccgatgccacccagtttatagagttctccaagctctctgattttgcagctgcc
ctggatcctcctctcctcatagccaaaccaaacaaagtccagctcatcgccatggacctg
cccatggtgagtggggaccggatccactgcctcgacattttatttgcctttacaaagcgt
gttttgggtgagagtggagagatggatgcccttcgaatacagatggaagaccggttcatg
gcatcaaacccctccaaagtctcctatgaacccatcacaaccactttaaaacgcaaacaa
gaggaggtgtctgctgctatcattcagcgtaatttcagatgttatcttttaagacaaagg
ttaaaaaaggtatcaagtgaatataacaaagaggcaattaaaggaaggattgacttacct
atcaaagaagacatgattattgacaaattaaatggaaactccaccccagaaaaaacagat
ggaagttcctctaccacatctcctccttcctatgatagtgtaacaaagccagacaaagaa
aagtttgagaaagacaaaccagaaaaagaaagcaaagggaaagaggtcagggaaaatcaa
aagtaa
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integrated database retrieval system
