Leptonychotes weddellii (Weddell seal): 102729638
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Entry
102729638 CDS
T08708
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
102729638 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lww04040
]
102729638 (HCN3)
Ion channels [BR:
lww04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102729638 (HCN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
102729638
NCBI-ProteinID:
XP_006734840
UniProt:
A0A2U3XTR5
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MEAEQRPTTGADERATPGLEAAPPAAPAPATAASGPLPAPASGPEPKRRQLGTLLQPTVN
KFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFF
KEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRSRYLRTWFLVDLI
SSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIF
HMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINRMVNHSWGRQY
SHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR
QYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFT
CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR
GARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFET
VAMDRLRRIGKKSSVLQRKRSEPSPGSSGGTVEQHLVQHDRDTARGVWGLAPGTGARLSG
KPVLWGPLVHAPLQTAAATSSVAIALTHQRGPLPLSPDSAATLLARSARRSAGSPASPLV
PVRAGPLLARGPWASTSRLPVPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGLRGRPL
SASQPSLPQRAAGDGSPGRKGSGSERLSSSGLLAKLPGTAQPPRPSVPESAAPRGPQLSA
NM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagcagcggccgacgacaggggccgacgaacgggcgacccctgggctggag
gcggctcctcctgctgccccggcgcctgcgaccgcggcctcgggaccgctcccggcgccc
gcgtctgggcccgagcccaagcggaggcagctcgggacgctgctccagcccacggtcaac
aagttctcccttcgcgtgtttggcagccacaaagcagtggaaatcgagcaggagagggtc
aagtcagcgggggcctggatcatccacccctacagcgacttccggttttactgggacctg
atcatgctcctgctgatggtggggaacctcattgtgctgcccgtgggcatcacgttcttc
aaggaggagaactccccaccttggatcgtcttcaacgtcctctcagacactttcttcctg
ctggatctggtgctcaacttccgcaccggcatcgtggttgaggagggtgctgaaatcctg
ctggcaccgcgggccatccggtcgcgctacctgcgcacctggttcctggtcgacctcatc
tcctccatcccggtggattacatcttcctggtggtggagctggaaccacgactggacgcc
gaggtctacaaaacagcgcgggcgctgcgcattgtgcgcttcaccaagatcctcagcctg
ctacggctgctgcgcctctcccgcctcatccgctacatacaccagtgggaggagatcttt
cacatgacctatgacctggccagtgccgtggtgcgcatcttcaacctcatcgggatgatg
ctgctgctgtgccattgggacgggtgtctgcagttcctggtccccatgctgcaggacttc
cctcctgactgctgggtctccatcaaccgcatggtgaaccactcgtgggggcgccagtat
tcccacgccctgttcaaggccatgagccacatgctgtgcattggctacgggcagcaagcc
cctgtaggcatgcccgacgtctggctcaccatgctcagcatgattgtgggtgccacgtgc
tacgccatgttcatcggccacgccacggcgctcatccagtccctggactcttcccgacgt
cagtaccaggagaagtacaagcaggtggagcagtacatgtccttccacaagctgccggct
gacacccggcagcgcatccacgagtactatgagcaccgctaccagggaaagatgttcgac
gaggagagcatcctgggcgagctgagcgagccgcttcgggaggagattattaacttcacc
tgccggggcctggtggcccacatgccgttgtttgcccacgccgaccccagcttcgtcaca
gccgtgctcaccaagctgcgctttgaggtcttccagccgggggacctcgtggtgcgtgag
ggctccgtgggcaggaagatgtacttcatccagcacgggctgctcagtgtgctggcacgt
ggcgcccgggacacccgcctcactgatggatcctactttggggagatctgcctgctgacg
cggggccggcgcacggccagcgtgcgggccgacacctactgccgcctgtactccctgagt
gtggaccatttcaacgccgtgctggaggagttccccatgatgcgccgggccttcgagact
gtggccatggatcggctgcgccgcatcggcaagaagagctctgtcctgcagcggaagcgc
tccgagccaagtcccggcagcagcgggggcaccgtggagcagcacttggtacagcacgac
agggacacggcccggggagtctggggcctggccccgggcacaggagctcggctcagcggg
aagccagtgctgtgggggccgctggtgcacgcacccctgcagaccgccgctgcgacctcc
agtgtggccattgccctgactcaccagcggggccctctgcccctctcccctgactctgca
gctactctccttgctcgctctgctcgacgctccgcgggctccccagcctccccgctagtg
cctgtccgagctggccctctgctggcccggggtccgtgggcatctacctcccgcctgcct
gtcccacctgcccgaaccctccacgccagcctgtcccgggctgggcgctcccaggtgtcc
ttgctgggtccccccccgggaggaggtggacggcgactaggacttcggggccgcccactc
tcagcctcccaaccctctctgcctcaacgggcagctggggatggctctcctgggcgtaag
ggctcaggaagtgaacgcctgtcctcttcagggctcctggccaagcttccagggacagcc
caaccccccaggccatcggtgcctgagtcagctgcccctcggggcccccagctctctgcc
aacatgtga
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