Leptonychotes weddellii (Weddell seal): 102729870
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Entry
102729870 CDS
T08708
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102729870 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lww04040
]
102729870 (SCN8A)
Ion channels [BR:
lww04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102729870 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
102729870
NCBI-ProteinID:
XP_030895229
UniProt:
A0A7F8RQE4
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPY
YYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQDCELPRWHMNDFFHSFLIVF
RVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDD
DGEMNNLQISVIRIKKGVAWAKLKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTG
ADIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNT
EDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFK
CCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRT
ILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCWLDFLIVAVRAGNKKVLGPHQQAVL
FLVPGEGEAAQGAGQGYRKERRWQLRRSARRGSHERSCVFPPPPTPQNKIQGIIFDFVTQ
QAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFTCECVLKMFALRHYYF
TIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLL
FALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQI
TTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMY
IAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYCKLADFADALEHPLRV
PKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKV
SYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICKKTTSNKLENGGTHREKRESTPST
ASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKEVRESKC
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggatccttttgtggacttggccatcaccatctgcattgtcctcaataccctgtttatg
gccatggagcaccatcccatgacaccacagtttgaacacgtcttggctgtaggaaatctg
gttttcactggaattttcacagcggaaatgttcctgaagctcatagccatggatccctac
tattatttccaagaaggttggaacatttttgacggatttattgtctccctcagtttaatg
gaactgggtctagcagacgtggaggggctttcggtgctgcgatctttccgattgctccga
gtcttcaaattggccaaatcctggcccaccctgaacatgctgatcaagattattggaaat
tcagtgggtgccctgggcaacctgaccctggtgctggccattattgtctttatctttgcc
gtggtaggaatgcaactctttggaaagagctacaaagagtgtgtctgcaagatcaaccag
gactgtgaactccctcgctggcacatgaatgactttttccattccttcctcattgtcttt
cgagtgttgtgcggggagtggatcgagaccatgtgggactgcatggaagtggcaggccag
gccatgtgcctcattgtcttcatgatggtcatggttattggcaacttggtggtgctgaac
ctgtttctggccttgcttctgagctccttcagtgcagacaacctggccgccacagacgac
gatggggaaatgaacaacctacaaatctcagtcatccggatcaagaagggggtggcttgg
gccaaactgaaagtgcatgccttcatgcaggcccacttcaagcagcgtgaggccgacgag
gtgaagcctctggacgagctgtatgaaaagaaggccaactgcatcgccaaccacactggg
gcagacatccaccggaacggtgacttccagaagaacggcaatggcacaaccagcggcatt
ggcagcagtgtggagaagtatatcattgatgaggaccacatgtccttcatcaacaacccc
aacttgactgtgcgggtgcccattgctgtcggagagtctgattttgagaacctcaacaca
gaggatgttagcagcgagtcggatcctgaaggcagcaaagataaactggatgatactagc
tcctctgaaggaagcaccatcgatatcaaacccgaagtagaggaagtccctgtggaacag
ccagaggagtacttggatccagatgcctgcttcacagaaggttgtgtccagcgattcaag
tgctgccaggtcaacatcgaagaagggctaggcaagtcctggtggatcctgaggaaaacc
tgcttcctcatcgtggagcacaattggtttgagaccttcatcattttcatgattctgctc
agcagtggcgccctggccttcgaggacatctacatcgagcagagaaagaccatccgtacc
atcctggaatacgctgacaaagtcttcacctacatcttcatcctggagatgctgctcaag
tggacagcctacggcttcgtcaagttcttcaccaatgcctggtgctggctggacttcctc
attgtggctgtacgtgctgggaacaagaaggttcttggcccacaccagcaggctgtcctc
ttcctggtgccaggagagggagaagcggcacagggggctggccagggttacagaaaagaa
aggcgatggcaacttcgacggtccgctcggagaggctctcatgaacgctcttgtgtcttt
cctccccctcccaccccccagaacaaaatccaaggtatcatctttgattttgtcactcaa
caagcctttgatatcgttatcatgatgctcatctgccttaacatggtgacaatgatggta
gagacagatacgcagagcaagcagatggaaaacattctctactggattaacctggtcttc
gtgatctttttcacctgtgagtgtgtgctcaaaatgtttgccttgaggcactactacttc
accattggctggaacatctttgacttcgtggtagtcatcctgtccattgtgggaatgttc
ctggctgatataattgagaaatactttgtttccccaaccctattccgagtcatccgattg
gcccgtattgggcgcatcttgcgtctgatcaaaggtgccaaagggattcgtaccctgctc
tttgccttaatgatgtccttgcctgctctgttcaacattggccttctgctcttcctggtc
atgttcatcttctccatctttgggatgtccaattttgcatatgtgaagcacgaggctggc
attgatgacatgttcaactttgagacctttggcaacagcatgatctgcctgtttcagatc
acaacctcggctggttgggatggcctgctgctgcccatcctaaaccgcccccctgactgc
agtctggataaggaacacccagggagtggcttcaagggagactgcgggaacccctcagtg
ggcatcttcttctttgtaagctacatcatcatctccttcctaatcgttgtgaacatgtac
atcgccatcatcttggagaacttcagtgtagccacggaggaaagtgccgaccctctgagc
gaggacgactttgagaccttctatgagatctgggagaagtttgaccccgatgccacccag
ttcatcgagtactgtaagctggcagactttgcggatgccttggagcaccctctccgagtg
cccaagcccaacaccatcgagctcattgccatggacctgcccatggtcagcggggatcgc
atccactgcttggacatcctttttgccttcaccaagcgggtcctgggagatagcggggag
ttggacatcctccggcagcagatggaggagcggttcgtggcatccaatccttccaaagtg
tcttacgagccaatcacgaccacactgcggcgcaagcaggaggaggtgtcggcggtggtc
ctgcagcgcgcctaccggggacatttagcaaggcggggcttcatttgcaaaaagaccact
tccaataagctggagaacggaggcacgcaccgggagaaaagagagagcaccccgtctaca
gcctccctcccgtcctatgacagtgtaactaaacctgagaaggagaaacagcaacgggca
gaggaaggaagaagggaaagggccaaaagacaaaaggaggtcagagaatccaagtgttag
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