Leptonychotes weddellii (Weddell seal): 102729919
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Entry
102729919 CDS
T08708
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04390
Hippo signaling pathway
lww04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
102729919 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102729919 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lww03000
]
102729919 (SOX2)
Transcription factors [BR:
lww03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102729919 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102729919
NCBI-ProteinID:
XP_006731304
UniProt:
A0A2U3XIJ2
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQ
DQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGM
ALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMS
QHYQSGPVPGTAINGTLPLSHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaag
aacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcag
cggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctg
ggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaag
cggctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaa
accaagactctcatgaagaaggataagtacacgctgcccggcgggctgctggccccgggc
ggcaacagcatggcgagcggggtcggggtgggcgccggcctcggagcgggcgtgaaccag
cgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcag
gaccagctgggctacccgcagcacccgggcctcaacgcacacggcgccgcgcagatgcag
cccatgcaccgctacgacgtgagcgcactgcagtacaactccatgaccagctcgcagacc
tacatgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatg
gcgcttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtggtt
acctcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagc
atgtacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcc
cagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcg
cacatgtga
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