KEGG   Leptonychotes weddellii (Weddell seal): 102729919
Entry
102729919         CDS       T08708                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww04390  Hippo signaling pathway
lww04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:lww00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    102729919 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102729919 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lww03000]
    102729919 (SOX2)
Transcription factors [BR:lww03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    102729919 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 102729919
NCBI-ProteinID: XP_006731304
UniProt: A0A2U3XIJ2
LinkDB
Position
Unknown
AA seq 322 aa
MYNMMETELKPPGPQQTSGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQ
DQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGM
ALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMS
QHYQSGPVPGTAINGTLPLSHM
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaag
aacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcag
cggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctg
ggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaag
cggctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaa
accaagactctcatgaagaaggataagtacacgctgcccggcgggctgctggccccgggc
ggcaacagcatggcgagcggggtcggggtgggcgccggcctcggagcgggcgtgaaccag
cgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcag
gaccagctgggctacccgcagcacccgggcctcaacgcacacggcgccgcgcagatgcag
cccatgcaccgctacgacgtgagcgcactgcagtacaactccatgaccagctcgcagacc
tacatgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatg
gcgcttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtggtt
acctcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagc
atgtacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcc
cagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcg
cacatgtga

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