Leptonychotes weddellii (Weddell seal): 102730259
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Entry
102730259 CDS
T08708
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03020
RNA polymerase
lww03420
Nucleotide excision repair
lww05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102730259 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
102730259 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102730259 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lww03021
]
102730259 (POLR2A)
03400 DNA repair and recombination proteins [BR:
lww03400
]
102730259 (POLR2A)
Enzymes [BR:
lww01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102730259 (POLR2A)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102730259 (POLR2A)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102730259 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
102730259
NCBI-ProteinID:
XP_006738963
UniProt:
A0A2U3Y5R9
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcggccccccctccggggacagcgcatgcccgctgcgcaccatcaagcga
gtgcagttcggagtcctcagtccggatgaactgaaacggatgtctgtgaccgagggcggc
atcaaataccccgagacaacggaggggggccgccccaagcttggggggctgatggaccca
aggcagggggtgatcgagcggaccggccgctgccagacctgtgcaggaaatatgacagag
tgtcctggccacttcggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacgatgaaagtgttgcgctgcgtctgcttcttctgctccaaactgctcgtggac
tctaacaacccaaaaatcaaggacatcctggccaagtccaaggggcagcccaagaagcgg
ctgacgcacgtgtatgacctgtgcaaggggaagaacatctgcgagggcggggaggagatg
gacaacaagtttggggtggagcagccggagggcgacgaggatttgaccaaagagaagggc
catggcggctgcgggcggtaccagccccgcatccggcgctcgggcctggagctgtacgcg
gagtggaagcacgtcaacgaggactcccaggagaagaagatcctgctgagtcctgagcga
gtgcacgagatcttcaagcgcatctccgatgaggagtgtttcgtgctgggcatggagccc
cgctacgcacggcccgagtggatgatcgtcaccgtcctgcccgtgcccccgctctctgtg
cggcccgctgtggtgatgcagggctctgcccgcaaccaggatgacctgactcacaagctg
gcggacatcgtgaagatcaacaatcagctgcggcgcaacgagcagaacggcgcggcggcc
cacgtcatcgccgaggacgtgaagcttctccagttccacgtggccaccatggtggacaat
gagctgcccggcttgccccgcgccatgcagaagtctggacgccccctcaaatccctgaag
cagcggctgaagggcaaggaaggccgggtccgagggaacctgatgggcaagcgggtggac
ttctcggcccgcaccgtcatcacccccgaccccaacctctccatcgaccaggtcggcgtg
ccccgctccatcgcggctaacatgacctttgcggagatcgtcacgcccttcaacatcgac
agactccaggagctggtgcgcaggggaaacagccagtacccaggggccaagtacatcatc
cgggacaatggcgatcgtattgacctgcgtttccaccccaagcccagtgatcttcacttg
cagaccggctacaaggtggaacggcacatgtgtgacggcgacatcgtcatcttcaaccgc
cagccgactttgcacaaaatgtccatgatggggcaccgagtccgcatcctcccctggtcc
acttttcgcttaaatctgagtgtgacgactccatacaatgctgactttgacggggatgag
atgaacttgcacctgccacagtctctggagacgcgggcggagatccaggagctggccatg
gtgccccggatgattgtcaccccccagagcaaccgccctgtcatgggtatcgtgcaggac
acgctcacggcagtgcgcaaattcacgaagagagacgtcttcttggagcggggggaggtg
atgaacctcctgatgttcctgtccacgtgggacgggaaggtgccgcagccagccatcctg
aagccgcggcccttgtggacgggcaaacagatcttctccctcatcataccaggccacatc
aactgcatccgcacccacagcacccatcccgatgatgaggacagtggtccttacaaacac
atctctcccggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctctgggcacgtcggctggctcgctggtccacatctcttacctggagatg
ggtcacgacgtcactcgcctcttctactccaatattcagaccgtcattaacaactggctt
ctcatcgagggtcataccattggcattggggactccatcgccgactctaagacctaccag
gacattcagaacaccattaagaaggccaagcaggacgtgatagaggtcatcgagaaggct
cataacaatgagctggagcccaccccggggaacactctgcggcagacctttgagaaccag
gtgaaccgtattctcaacgacgcccgagacaagactggttcctctgctcagaagtccctg
tctgagtacaacaacttcaagtccatggtggtgtccggggccaaaggctccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggaagggaaacggatcccgttt
ggattcaagcaccggaccctgcctcacttcatcaaggacgactacgggcccgagagccga
ggctttgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccacgcc
atggggggtcgcgagggcctcatcgacacggctgtcaagactgccgagactgggtacatc
cagcggcggctcatcaagtccatggagtcggtgatggtgaaatacgatgccactgtgcgc
aactccatcaaccaggtggtgcagctacgctatggcgaggatggcctggccggcgagagc
gtcgagttccagaacctggctactctgaagccatccaacaaggcttttgagaagaagttc
cgcttcgactacaccaacgagagggccctgcggcgcactctgcaggaggacctggtgaag
gacgtgctgagcaacgcgcacattcagaatgagctggagcgcgaatttgagcggatgcgt
gaggaccgggaggtgctcagggtcatcttcccaactggcgacagcaaggtggtgctcccc
tgtaacctgctgcgcatgatctggaacgctcagaagatcttccacatcaacccccgcctg
ccctccgacctgcaccccatcaaggtcgtagagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgaccccctgagccggcaagctcaggagaacgccacgcttctc
ttcaacatccacctgcgttccacgctgtgctcccgccgcatggccgaggagttccggctc
agcggggaggccttcgactggctgctcggagagatcgagtccaagttcaaccaggccatt
gcccatcccggggagatggtgggcgccctggccgcacagtcccttggagaacctgccacc
cagatgaccttgaacacctttcattatgctggtgtgtctgccaagaatgtgaccctgggg
gtgccccgcctcaaggagctcatcaacatctccaagaagccgaagacaccttcgcttact
gtcttcctgctgggccagtcggctcgagatgctgagagagccaaggacattctgtgccgt
ctggaacatacgacgttgaggaaggtgaccgccaacaccgccatctactatgaccccaac
ccccagagcacggtggtggcagaggatcaggagtgggtgaatgtctactacgagatgcct
gactttgacgtggcccggatctccccctggcttctgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgagaagatcaatgctggtttcggc
gatgacttgaattgcatctttaacgacgataacgccgagaagctggtactccggatccgc
atcatgaacagcgacgaaaacaagatgcaagaggaggaggaggtggtggacaagatggat
gacgacgttttcctgcgctgcatcgagtccaacatgctgaccgatatgaccctgcagggc
atcgagcagatcagcaaggtgtatatgcacctgccgcagacagataacaagaagaagatc
attatcacggaggacggggagttcaaggccctgcaggagtggatcctggagacggatggt
gtgagcctgatgcgggtgctgagcgagaaggacgtggaccctgtgcgcaccacgtccaac
gacatcgtggagatcttcacggtgctgggcatcgaagctgtgcggaaggctctggagcgg
gaactgtaccacgtcatctcctttgacggctcctacgtcaattaccgccacttggctctg
ctctgtgacaccatgacctgtcgcggccacttgatggccatcacccgacatggggtcaac
cgccaggataccggccctctcatgaagtgctcctttgaggagacggtggacgtgctgatg
gaagcggccgcccacggagagagcgaccccatgaagggggtgtcggagaacatcatgctg
ggccagctcgccccggccggcaccggctgcttcgacctgctgctcgacgcggagaagtgc
aagtacggcatggagatccccaccaacatccccggcttgggggccgccggacctaccggc
atgttcttcggctcggcgcccagtcccatgggagggatttctccggccatgacaccctgg
aaccagggcgcaactccagcgtatggcgcctggtcccccagtgttgggagcggaatgacc
ccgggggcagccggcttctcccccagcgccgcttccgacgccagtggcttcagccccggg
tactcgcctgcctggtcccccacgccgggctccccgggctcccccggcccctccagcccg
tacatcccctcaccaggtggtgcgatgtctcccagctactccccgacctcacctgcctat
gagcctcgctcccctgggggctatacgcctcagagtccctcttactcccccacctcgccc
tcctactcccccacctctccgtcctactctccaactagtcccaactatagtcccacgtca
cccagctactccccgacttctcccagctactccccaacctcgcccagctactccccgacc
tcacccagctactccccgacctctcccagctactctccaacttccccgagctactcgccc
acctctcccagttactccccgacctctcccagctactctcccacctctcccagctactcc
ccaacctctcccagctactcgcccacatcccccagctattctcccacatcccccagctac
tctcccacgtccccgagctactcccccacgtccccgagctactccccgacgtccccgagc
tactcaccaaccagccctaactattctccaaccagtcccaattacaccccgacgtcaccc
agttatagcccgacatcacccagctactccccaactagtcccaactacacgcccacgagc
cccaactatagcccgacctctccaagttactctccaacttcgcccagctactccccaacc
tcgccaagctactccccatcaagcccacgatacacaccacagtctccaacctataccccg
agctcccccagctacagccccagctcccccagctacagcccaacctcgccgaagtacacc
cccaccagtccctcctacagccccagctccccagagtacaccccgacctcccccaagtac
tcacccaccagcccgaaatactcacccacctcccccaagtactcgcccaccagccccacc
tactcacccaccaccccaaaatactccccaacatctcctacttattcgccaacctctccc
gtctataccccaacctcccccaagtactcgcccaccagccccacctattcgcccacctcc
cccaagtactcgcccaccagccccacctactcgcccacctcccccaaaggctccacctac
tcccccacttcccctggctattcccccaccagccccacctacagcctcaccagtccggcc
atcagcccggacgacagtgatgaggagaactga
DBGET
integrated database retrieval system
