Leptonychotes weddellii (Weddell seal): 102730260
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Entry
102730260 CDS
T08708
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X2
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04137
Mitophagy - animal
lww04141
Protein processing in endoplasmic reticulum
lww05014
Amyotrophic lateral sclerosis
lww05022
Pathways of neurodegeneration - multiple diseases
lww05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102730260 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102730260 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
102730260 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102730260 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
102730260 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102730260 (VCP)
03009 Ribosome biogenesis [BR:
lww03009
]
102730260 (VCP)
04131 Membrane trafficking [BR:
lww04131
]
102730260 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lww04147
]
102730260 (VCP)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102730260 (VCP)
Ribosome biogenesis [BR:
lww03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102730260 (VCP)
Membrane trafficking [BR:
lww04131
]
SNARE
SNARE associated proteins
Others
102730260 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102730260 (VCP)
Exosome [BR:
lww04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102730260 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
102730260
NCBI-ProteinID:
XP_006739211
UniProt:
A0A2U3Y673
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagctgattcaaaaggtgatgacttatcaacagccattcttaaacagaag
aaccgtcccaatcgattaattgtcgatgaagccatcaatgaggacaacagtgtggtgtct
ttgtcccagcccaagatggatgagctgcagttgttccgaggtgacacagtcttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacgtgttctgatgag
aagattcgaatgaatagagttgttcggaacaacctccgcgtacacctaggggatgtcatc
agcatccagccgtgccctgatgtgaagtacggcaaacgtatccatgtgctacccattgat
gacacggtggaaggcatcactggcaatctcttcgaggtataccttaagccatacttcctg
gaagcttatcgacctatccggaaaggagatattttccttgtccggggtggaatgcgtgct
gtagagttcaaagtagtggagacagatcccagcccttactgcattgttgctccagacaca
gtgatccactgtgaaggggagcctatcaaacgagaggatgaggaagaatccttgaatgaa
gtaggctatgatgatattggtggctgcaggaaacagctggctcaaataaaggagatggta
gagctacccctcagacatcctgccctctttaaggcaattggtgtcaagcctcctcgggga
atcctgctctatggacctcctgggactgggaagaccctaattgcccgagctgtggcaaat
gagactggagccttcttcttcttgatcaatggtcctgagatcatgagcaagttggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgctcctgctatc
atcttcattgatgagctagatgccatcgctcccaaaagagagaaaacccacggggaggtg
gaacggcgtattgtatcacagttgttgaccctcatggatggcctaaagcagagagcacat
gtgattgtcatggcagcaacaaacagacccaatagcattgacccagcccttcggcgattt
ggtcgctttgacagggaggtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaagctggcagacgatgtggacctggaacaggtcgcc
aatgagactcatgggcatgtgggcgctgacttagcagccctgtgctcagaagctgctctt
caagctatccgcaagaagatggacctcattgacttagaggatgagactattgatgctgaa
gtcatgaactctctggcagttactatggatgacttccggtgggccctgagccagagcaat
ccatcagcactgcgggaaactgtggtggaggtaccacaggtgacctgggaggacattggg
ggcctggaagatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcaccca
gacaaattcctcaaatttggcatgacaccctccaagggagtactcttctatggacctcct
ggctgtgggaaaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatc
tccatcaagggtcctgagctgctcaccatgtggtttggagagtctgaagccaatgtcagg
gaaatctttgacaaggcccgccaagctgccccctgtgtactgttctttgatgagctggat
tcaattgccaaggcgcgtggtggtaacattggagatggtggtggggctgcagaccgagtc
atcaaccagatcctgacagaaatggatggcatgtctacaaaaaagaatgtgtttattatc
ggcgctaccaatcggcctgacatcattgatcctgctatcctgagacctggccgcctcgat
cagctcatctatattccacttcctgatgagaagtcccgtgttgccatcctcaaggccaac
ctgcgcaagtccccagttgccaaggatgtggatttggagttcctggctaagatgactaat
ggcttctctggagctgaccttacagagatttgccagcgtgcttgcaagctggccatccgt
gaatccatcgagagtgaaattaggcgagaacgagagaggcagaccaacccgtctgccatg
gaggtagaagaagatgatccagtgcctgagatccgccgagatcactttgaggaagccatg
cgctttgcccgccgttctgtcagtgacaatgacatccggaagtatgagatgtttgctcag
acccttcagcagagtcggggctttggcagcttcagattcccttcaggaaaccaaggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagcgtgtacacggaagacaat
gatgatgacctgtatggctaa
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