Leptonychotes weddellii (Weddell seal): 102730261
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Entry
102730261 CDS
T08708
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102730261 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lww03021
]
102730261 (TAF5)
03036 Chromosome and associated proteins [BR:
lww03036
]
102730261 (TAF5)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102730261 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
102730261 (TAF5)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102730261 (TAF5)
STAGA complex
102730261 (TAF5)
TFTC complex
102730261 (TAF5)
SAGA complex
102730261 (TAF5)
SLIK complex
102730261 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
Beta-prop_WDR5
CDK5RAP3
Beta-prop_WDR3_1st
NBCH_WD40
Beta-prop_VPS8
LisH_PAC1
ABM-like
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
102730261
NCBI-ProteinID:
XP_030890541
UniProt:
A0A7F8RBH5
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGTTNNGPNGGGGNVATASSSAGG
DGGTPKPSAAVSAVAPAGAAPVPAAAPEAGVPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGTGAPGEADGAGTEAASALLSRVTASAPGPAAPDPPGTGASGAAAVSGLAT
GPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagccagagggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcgacggcgtcgtcgtcggccggcggg
gatggtgggacccccaagccctcggcggctgtctccgccgttgctccggcgggggcggcc
ccggtgcccgccgctgctccggaggccggcgttccccacgaccgacagactctgctggcc
gtgctgcagttcctgcggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgag
gcccggctgctggaggaggcagtggcgggcaccggagccccgggagaggcggacggcgcc
ggtacagaggcggctagcgcgcttctcagccgggtcacagcctcggcccccggccccgcg
gcccctgaccctccgggcaccggcgcttcgggggccgccgccgtctcgggcttagcgaca
ggtcctgcggctccggggaaagttggaagtgtagctgtagaagaccagccggatgtcagt
gctgtgctgtcagcctacaaccaacaaggggaccccacaatgtatgaagaatactatagt
ggactgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactg
ttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaa
gcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagag
ccagaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcctaaaaaagatagcattggatccaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaatccctcttccagagttgaaagattcagataagttggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccc
tccatttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtg
acacccaaaaagcttcgtagtgttaaacaagcagcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaataatggatgagaaaaccgcaagtgagttgaagattttg
tatggtcacagcgggcctgtctatggagccagcttcagtccggataggtaa
DBGET
integrated database retrieval system
