Leptonychotes weddellii (Weddell seal): 102730310
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Entry
102730310 CDS
T08708
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03013
Nucleocytoplasmic transport
lww03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102730310 (PNN)
03015 mRNA surveillance pathway
102730310 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102730310 (PNN)
03041 Spliceosome [BR:
lww03041
]
102730310 (PNN)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102730310 (PNN)
Spliceosome [BR:
lww03041
]
Complex C
Other components
EJC/TREX
102730310 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
102730310
NCBI-ProteinID:
XP_006730006
UniProt:
A0A2U3XEX5
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVKENASALEMENEPEEKEEKESEPQPEPVAHLQPLP
QPQPEPQLQPEPQPQPEPQLQLQSQPQPQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtaagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatattcgcaagctcaccggacgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaaggagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttactgatgggcactcttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcgccttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcaaccggaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagtggaaagtgtagaaccttcagaaaatgaa
actagcaaagaactggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcccgtgaaagagaatgccagtgctctagaaatggaaaatgagcctgaggaa
aaagaagagaaagaatctgagccccagcctgagcctgtggctcacctccagcccctgcct
cagcctcagcctgagcctcagcttcagcctgagccgcagccgcagcctgagccccagctg
cagctgcagtcccagccccaaccccag
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